Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_M08
(848 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.001
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.018
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.041
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 29 0.041
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.054
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 28 0.094
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 28 0.12
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.17
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.17
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.22
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.22
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.22
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.22
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.22
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.38
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 26 0.50
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.5
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 23 4.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.2
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 79 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 243
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 244 MNWIDKRLSWNA 279
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 85 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 252
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 253 IDKRLSWNAG 282
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 27.5 bits (58), Expect = 0.17
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 414 VSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
V + RL M L+ +P D Q C QFGS
Sbjct: 118 VLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 30.7 bits (66), Expect = 0.018
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
+ RLW+PDV++ N+A G Y V NNG+ L
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCL 137
Score = 22.2 bits (45), Expect = 6.2
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +1
Query: 58 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 222
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 223 RIQADLQMNWIDKRLSWNAGXVG 291
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.5 bits (63), Expect = 0.041
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V++NGS L
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.5 bits (63), Expect = 0.041
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V++NGS L
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.054
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V++NGS L
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCL 100
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 28.3 bits (60), Expect = 0.094
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 375 TTLSAPVYLITAPVSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
TT++ + T V W + + + +P D QTC +FGS
Sbjct: 120 TTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGS 165
Score = 27.1 bits (57), Expect = 0.22
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +2
Query: 284 EWGCSTWL-VSSERLWRPDVVLLNAA 358
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.12
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +1
Query: 106 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 264
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 265 LSWN 276
L +N
Sbjct: 95 LRFN 98
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAA 358
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 375 TTLSAPVYLITAPVSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
T ++ + T V W + + ++ +P D QTC +FGS
Sbjct: 120 TIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA 358
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 24.2 bits (50), Expect = 1.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 453 SMXLDXWPXDMQTCTFQFGS 512
S+ ++ +P D+QTC + GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA 358
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +3
Query: 414 VSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
V W + + ++ +P D QTC +FGS
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.17
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA 358
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
Score = 25.8 bits (54), Expect = 0.50
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +3
Query: 405 TAPVSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
T V W + + ++ +P D QTC +FGS
Sbjct: 134 TGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V+++GS L
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V+++GS L
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V+++GS L
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V+++GS L
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.22
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSGL 418
++ +LW+PD+++ N+A G Y V+++GS L
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCL 100
Score = 25.8 bits (54), Expect = 0.50
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +1
Query: 196 NIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.38
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 290 GCSTWLVSSERLWRPDVVLLNAA 358
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
Score = 26.2 bits (55), Expect = 0.38
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +3
Query: 375 TTLSAPVYLITAPVSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
T ++ T VSW + + ++ +P D Q+C +FGS
Sbjct: 133 TLMTKATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.8 bits (54), Expect = 0.50
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 414 VSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
V W+ + ++ + +P D QTC +FGS
Sbjct: 139 VLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGS 171
Score = 25.0 bits (52), Expect = 0.88
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +2
Query: 317 ERLWRPDVVLLNAAATTAGDYALR 388
+++W+PD+VL N A G+Y +R
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVR 126
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 157 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGXVG 291
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 308 VSSERLWRPDVVLLNAA 358
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/33 (27%), Positives = 12/33 (36%)
Frame = +3
Query: 414 VSWIKRLDXXTPISMXLDXWPXDMQTCTFQFGS 512
VS + + + WP D C FGS
Sbjct: 157 VSCVPSVKHVAKCATDFSSWPYDTHRCRINFGS 189
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/27 (33%), Positives = 11/27 (40%)
Frame = -2
Query: 781 QRPXEGXXPGXPPXETXXRXRXXPGPG 701
Q P G PG PP + + P G
Sbjct: 44 QGPPPGGPPGAPPSQNPSQMMISPASG 70
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.2
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 317 ERLWRPDVVLLN 352
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,618
Number of Sequences: 438
Number of extensions: 3624
Number of successful extensions: 47
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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