Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_M07
         (801 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    44   2e-04
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    41   9e-04
AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical ...    38   0.006
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    38   0.011
AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical ...    28   6.8  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 42/172 (24%), Positives = 75/172 (43%)
 Frame = +3

Query: 45  FADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPNITSS 224
           FADDT +Y S  K       LQ A+  +  W +  ++ +N +K              T  
Sbjct: 108 FADDTKLYASTPKTES-ENNLQSALDAVVDWTKGSKLTLNQSK--------------TVH 152

Query: 225 IPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRL 404
           + +  RR +        L G PI   +  + LG  +   + F  H +   + A F L  +
Sbjct: 153 VTVGKRRIDFK----YHLDGYPIERKAITRDLGFLISEKLDFSDHWRKCINLAKFQLANM 208

Query: 405 YPMLCCRSKLSLRNKVTLYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRF 560
           +      +K  +   + LYKT IRP + Y +VV +   +++ K+++ +Q+ F
Sbjct: 209 FNKYSTSNKKLM---ILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAF 257


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 41.1 bits (92), Expect = 9e-04
 Identities = 26/95 (27%), Positives = 47/95 (49%)
 Frame = +3

Query: 276 LFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCCRSKLSLRNKVT 455
           L G PI   +  + LG  +   + F  H K   + A F L  ++      +K  +   + 
Sbjct: 136 LDGYPIERKTITRDLGFLISEKLDFSEHWKKSINLAKFQLANIFNQYSTSNKKLM---IL 192

Query: 456 LYKTCIRPVMTYASVVFAHAARTNLKSLQVIQSRF 560
           LYKT IRP + Y +VV +   +++ K+++ +Q+ F
Sbjct: 193 LYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAF 227


>AF036692-9|AAB88330.1|  389|Caenorhabditis elegans Hypothetical
           protein C44B12.7 protein.
          Length = 389

 Score = 38.3 bits (85), Expect = 0.006
 Identities = 25/84 (29%), Positives = 41/84 (48%)
 Frame = +3

Query: 288 PIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFILGRLYPMLCCRSKLSLRNKVTLYKT 467
           PI   +  + LG+  D  +TF+PHIK +    +  L R   +L     L       L+KT
Sbjct: 188 PISPSNIARDLGILTDSKLTFKPHIKKI---VSLALLRCKQLLKSFKSLCPEFYCNLFKT 244

Query: 468 CIRPVMTYASVVFAHAARTNLKSL 539
            I P++ Y S V++    ++L +L
Sbjct: 245 YILPLIEYGSAVYSPKPSSSLSTL 268


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
            protein F21E9.1 protein.
          Length = 1170

 Score = 37.5 bits (83), Expect = 0.011
 Identities = 43/159 (27%), Positives = 71/159 (44%)
 Frame = +3

Query: 33   HLALFADDTAIYYSCRKMSLLHRRLQIAVATMGQWFRKWRIDINPTKSAAVLFKRGRPPN 212
            +++ FADD  I+++    +++   + I V+    W +   + + PTKSA           
Sbjct: 908  NISCFADDVKIFHT--DPTIIQNSIDIIVS----WSKLNELPLAPTKSAL---------- 951

Query: 213  ITSSIPLRSRRANTSAVSPITLFGQPIPWVSKVKYLGVTLDRGMTFRPHIKTVRDRAAFI 392
                + L +R  N S     ++ G PI   S V+ LG+  D  + F  HI  V   +   
Sbjct: 952  ----LALGTRNKNQS----YSVDGVPITPSSTVRDLGLITDCKLKFEHHIVKV---SCLA 1000

Query: 393  LGRLYPMLCCRSKLSLRNKVTLYKTCIRPVMTYASVVFA 509
            + R   +L   S  S +    LYKT + P+M Y S V+A
Sbjct: 1001 MLRSKQILKAFSSNSPKFYAHLYKTYVAPIMNYCSEVYA 1039


>AL132948-5|CAC51071.1|  321|Caenorhabditis elegans Hypothetical
           protein Y39B6A.6 protein.
          Length = 321

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 14/33 (42%), Positives = 16/33 (48%)
 Frame = -2

Query: 158 VYSPLPEPLSHGGYCDLESPMKQRHLPTRVVDS 60
           VYSP+P P  H G   + S M      T V DS
Sbjct: 13  VYSPVPSPSYHNGRSMVSSDMYTYTTDTNVTDS 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,938,443
Number of Sequences: 27780
Number of extensions: 342842
Number of successful extensions: 844
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)