Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_M01
(742 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 159 3e-39
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.040
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.040
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.040
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.040
AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical... 29 3.5
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 28 8.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 8.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 8.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 8.0
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 159 bits (385), Expect = 3e-39
Identities = 71/109 (65%), Positives = 89/109 (81%)
Frame = +3
Query: 60 MSGGLDVLALNEEDITKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 239
MSGG AL EED+ K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 240 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFT 386
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG T
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLT 109
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 361
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 361
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 361
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 361
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.040
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 239 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 361
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>AF078157-11|AAG24070.1| 401|Caenorhabditis elegans Hypothetical
protein F25E5.10 protein.
Length = 401
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +3
Query: 336 HTGATPIAGRFTPGAFTXPXSXAAFPXNP 422
HT TP G FT G+ T S P NP
Sbjct: 327 HTNTTPNPGSFTTGSGTVTGSDGTCPGNP 355
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 27.9 bits (59), Expect = 8.0
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 12/63 (19%)
Frame = +2
Query: 101 YHQNAC-CNHPSWGRKC*LPDGDLCLQTTC*W-----------YPCDQLASYLGKTCSGC 244
Y++ C C+ +G KC D+C TC + Y CD L Y GK C
Sbjct: 317 YNKFTCVCDDGFFGDKC--QYSDICTSATCLYGGTCTELNNGDYKCDCLLQYFGKNCEVI 374
Query: 245 SCC 253
+ C
Sbjct: 375 NRC 377
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 119 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 295
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 296 TALRSACCTEV-CRAHRCYAYCGT 364
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 119 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 295
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 296 TALRSACCTEV-CRAHRCYAYCGT 364
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 27.9 bits (59), Expect = 8.0
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +2
Query: 119 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSC-CRSHREPR*CVRHLI 295
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 296 TALRSACCTEV-CRAHRCYAYCGT 364
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,340,637
Number of Sequences: 27780
Number of extensions: 246624
Number of successful extensions: 539
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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