Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L23
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 55 9e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 53 3e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 53 4e-09
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 51 2e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 6e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 48 8e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 45 7e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 45 1e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 44 2e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 40 4e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 34 0.001
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 24 2.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.5
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 22 6.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.0
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.8 bits (131), Expect = 2e-10
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +3
Query: 105 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVNLTLHLRHANIRESESTVRIQADLQ 278
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 452
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 453 WIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
++ + + + D C KFGS +Q D
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 56.8 bits (131), Expect = 2e-10
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Frame = +3
Query: 105 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVNLTLHLRHANIRESESTVRIQADLQ 278
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 279 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVS 452
+ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 453 WIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
++ + + + D C KFGS +Q D
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 56.0 bits (129), Expect = 4e-10
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 365
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 366 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTF 533
PD+VL N A G+Y +R + + NG V W+ + ++ + D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 534 KFGSRMXXXDQ 566
KFGS DQ
Sbjct: 168 KFGSWTFNGDQ 178
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 54.8 bits (126), Expect = 9e-10
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G Y V++NGS ++ + + + D C KFGS +Q D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G Y V+++GS ++ + M + D C KFGS +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 53.6 bits (123), Expect = 2e-09
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G Y V+++GS ++ + M + D C KFGS +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.2 bits (122), Expect = 3e-09
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFG 542
PD+VL NA A +A + + G V W + + ++ D TC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 543 S 545
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 446
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 447 VSWIKRLDISTPXSMQLDXGANDMHTCTFKFGS 545
V W + + ++ D TC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 52.8 bits (121), Expect = 4e-09
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G Y V+++GS ++ + + + D C KFGS +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G Y V+++GS ++ + + + D C KFGS +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Frame = +3
Query: 231 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 404
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G Y V+++GS ++ + + + D C KFGS +Q D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Frame = +3
Query: 195 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 362
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 363 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKF 539
PD+VL N A G + +A + G V W + + + D TC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 540 GS 545
GS
Sbjct: 164 GS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +3
Query: 192 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 365
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 366 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTF 533
PD+VL N A G+Y + +A V +G V W + S+ ++ D+ TC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 534 KFGS 545
K GS
Sbjct: 170 KLGS 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 50.8 bits (116), Expect = 2e-08
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 437
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 438 NGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGSRMXXXDQXD 572
G VSW + + ++ D +C KFGS Q D
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.8 bits (111), Expect = 6e-08
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 446
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 447 VSWIKRLDISTPXSMQLDXGANDMHTCTFKFGS 545
++ + + + D C KFGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 31/120 (25%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 195 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 371
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 372 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGS 545
+L N A + VS+ G V W+ + + ++ D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 48.0 bits (109), Expect = 1e-07
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 273 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 437
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 438 NGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGS 545
G V W + + ++ D TC KFGS
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 45.2 bits (102), Expect = 7e-07
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 404
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 405 GDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGS 545
R+ +G V + RL I M L+ D C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.8 bits (101), Expect = 1e-06
Identities = 32/143 (22%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +3
Query: 192 KIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 362
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 363 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTF 533
PD+ + N+ T G V ++GSVS + + + D H C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 534 KFGSRMXXXDQXDFXXDTXXXRM 602
FGS + ++ + D M
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 44.0 bits (99), Expect = 2e-06
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Frame = +3
Query: 123 RNITVPHDRLAPRNVRSGLPPDSK---IVVNLTLHLRHAN-IRESESTVRIQADLQMNWI 290
RNIT+ + L + LP K VV + +R + E + + + +W
Sbjct: 35 RNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWR 94
Query: 291 DKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIK 461
D RLS+ S + ER+WRPD N + + R+S +G + +
Sbjct: 95 DSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
Query: 462 RLDISTPXSMQLDXGANDMHTCTFKFGS 545
RL I M+L D +C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 39.5 bits (88), Expect = 4e-05
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 6/126 (4%)
Frame = +3
Query: 186 DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 356
D +V + L +R A I + + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 357 LWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTC 527
+W PD+ N + + R+ NGSV + R+ ++ M L D C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 528 TFKFGS 545
+ + S
Sbjct: 175 SLRMAS 180
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 38.7 bits (86), Expect = 7e-05
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +3
Query: 201 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 377
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 378 L 380
+
Sbjct: 122 M 122
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.001
Identities = 28/107 (26%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +3
Query: 234 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 413
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 414 ALR---ARVSNNGSVSWIKRLDISTPXSMQLDXGANDMHTCTFKFGS 545
R R+S +GSV++ R + M L D CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 23.8 bits (49), Expect = 2.0
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Frame = +3
Query: 168 RSGLPPDSKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGC 329
+ GLP ++V+ + + N I + R+ ++ +WI+ RL + G+
Sbjct: 6 KQGLP----VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYV 61
Query: 330 STWLVSSERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPXSMQ 494
+ + LW+PD LNA + AL + S+ N +V + R+ M+
Sbjct: 62 TLPPEFFDSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQME 119
Query: 495 LDXGANDMHTC 527
D+ C
Sbjct: 120 FQLYPMDIQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.5
Identities = 12/35 (34%), Positives = 12/35 (34%), Gaps = 3/35 (8%)
Frame = -1
Query: 819 GPXXPXXXXPXPP---GXXGPGQGPXXTGXPAXPP 724
GP P P P QGP G P PP
Sbjct: 22 GPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 338 PSAAAPLPCVPTQS 297
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.2 bits (45), Expect = 6.0
Identities = 15/81 (18%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPXSMQLDXGANDMH 521
+ +WRPD NA + T + + + ++ ++ +L + +M +D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TCTFKFGSRMXXXDQXDFXXD 584
C + S D+ F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 138 GQ*CCVFAFCRTSYSTSEEKPVTR 67
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 225,808
Number of Sequences: 438
Number of extensions: 5933
Number of successful extensions: 60
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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