Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L22
(1142 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 29 0.28
02_05_0002 - 24849189-24849825,24850267-24850328 32 0.74
06_03_1274 + 28897491-28897707,28897804-28897935,28898029-288980... 31 2.2
01_01_0083 + 631196-631675 31 2.2
07_01_0080 + 587674-588510 26 2.9
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 30 3.0
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.0
02_04_0382 - 22501041-22501279,22501717-22501810 30 3.0
02_02_0240 + 8196140-8198248,8198381-8198650 30 3.9
07_03_1136 + 24218601-24218734,24218769-24219906 25 4.7
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 29 5.2
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847... 29 6.9
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 29.5 bits (63), Expect(2) = 0.28
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 530 GGGGGGXXXXPPPPXKXXKPXLFFFF 453
GGGGGG PPPP F+++
Sbjct: 130 GGGGGGAYPTPPPPNPFLPYFPFYYY 155
Score = 23.0 bits (47), Expect(2) = 0.28
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 542 PXXGGGGGGG 513
P GGGGGGG
Sbjct: 115 PPTGGGGGGG 124
>02_05_0002 - 24849189-24849825,24850267-24850328
Length = 232
Score = 32.3 bits (70), Expect = 0.74
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 453 KKKKKGGFXXFXXGGGGXXXXPPPPPP 533
KKK+K GGGG PPPPPP
Sbjct: 198 KKKRKKPQPADTSGGGGHPHPPPPPPP 224
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 453 KKKKKGGFXXFXXGGGGXXXXPPPPPP 533
KK+KK GGG PPPPPP
Sbjct: 199 KKRKKPQPADTSGGGGHPHPPPPPPPP 225
>06_03_1274 +
28897491-28897707,28897804-28897935,28898029-28898096,
28898216-28898280,28898468-28898534,28898630-28898917,
28898995-28899102,28899236-28899487,28899918-28899997,
28900092-28900185,28900728-28900810,28901319-28901873,
28902085-28902616
Length = 846
Score = 30.7 bits (66), Expect = 2.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 542 PXXGGGGGGGXXXXPPPPXK 483
P GGGGGG PPPP +
Sbjct: 30 PRGAGGGGGGGGAVPPPPVR 49
>01_01_0083 + 631196-631675
Length = 159
Score = 30.7 bits (66), Expect = 2.2
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = -1
Query: 542 PXXGGGGGGGXXXXPPPPXKXXKPXLFFFF 453
P GGGGGGG PPP P +++
Sbjct: 94 PAGGGGGGGGFNYPAPPPPNPIVPWYPWYY 123
Score = 29.5 bits (63), Expect = 5.2
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 542 PXXGGGGGGGXXXXPPPP 489
P GGGGGGG P PP
Sbjct: 93 PPAGGGGGGGGFNYPAPP 110
>07_01_0080 + 587674-588510
Length = 278
Score = 26.2 bits (55), Expect(2) = 2.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPP 533
GG G PPPPPP
Sbjct: 83 GGDGMFRRPPPPPP 96
Score = 22.6 bits (46), Expect(2) = 2.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 516 PPPPPPXXG 542
PPPPPP G
Sbjct: 94 PPPPPPSSG 102
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 542 PXXGGGGGGGXXXXPPPP 489
P GGGGGG PPPP
Sbjct: 31 PSCGGGGGGAGPTPPPPP 48
Score = 29.5 bits (63), Expect = 5.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 491 GGGGXXXXPPPPPPXXXXKKKK 556
GGGG PPPPPP ++ +
Sbjct: 36 GGGGAGPTPPPPPPPPHHRRAR 57
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 3.0
Identities = 34/132 (25%), Positives = 37/132 (28%)
Frame = -2
Query: 400 PPPRGGXFFXXPPPXVXFFLKKXGXXFXPPXGGXXXXXXXXXXXKRGGKIXXXXXPXXPL 221
PPP G PPP G PP GG G P P+
Sbjct: 1100 PPPSIGAGAPPPPPPPGGIT---GVPPPPPIGGLGGHQAPPAPPLPEG--IGGVPPPPPV 1154
Query: 220 GGFPXPKNPXXGGFNXXGXPQXGQLKXFXPGXXPKRGYPXIXGVXKTPXVRGPKXQGGXF 41
GG P P G P P P RG+ + G P P G
Sbjct: 1155 GGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPG-- 1212
Query: 40 XXEXFPXRPPGG 5
P PPGG
Sbjct: 1213 -VPGGPPPPPGG 1223
>02_04_0382 - 22501041-22501279,22501717-22501810
Length = 110
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 485 FXGGGGXXXXPPPPPPXXXXK 547
+ GGGG PPPPPP K
Sbjct: 88 YYGGGGGYGKPPPPPPCCPCK 108
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 29.9 bits (64), Expect = 3.9
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -2
Query: 406 PXPPPRGGXFFXXPPPXVXFFLKKXGXXFXPP 311
P PPP GG PPP V + G PP
Sbjct: 22 PPPPPPGGGAKPEPPPTVATHTRPLGIIHPPP 53
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 25.0 bits (52), Expect(2) = 4.7
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 533 GGGGGGGXXXXPP 495
GGGGGGG PP
Sbjct: 149 GGGGGGGALARPP 161
Score = 23.0 bits (47), Expect(2) = 4.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 542 PXXGGGGGGG 513
P GGGGGGG
Sbjct: 133 PAPGGGGGGG 142
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 29.5 bits (63), Expect = 5.2
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 542 PXXGGGGGGGXXXXPPPPXKXXK 474
P GGGGGGG P PP K
Sbjct: 50 PGGGGGGGGGMGIPPRPPPPEIK 72
>04_03_0977 +
21381857-21383757,21384299-21384458,21384669-21384717,
21385117-21385169
Length = 720
Score = 29.1 bits (62), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 492 GGGGXXXXPPPPPP 533
GGGG PPPPPP
Sbjct: 93 GGGGWVQLPPPPPP 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,907,870
Number of Sequences: 37544
Number of extensions: 353342
Number of successful extensions: 10624
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7025
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3468127212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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