Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L22
(1142 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 1.2
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 31 1.5
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 31 2.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 31 2.0
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 31 2.0
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 2.0
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 31 2.0
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 2.0
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 31 2.0
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 2.0
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 30 3.5
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 30 3.5
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 30 3.5
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 30 3.5
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 29 6.1
AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical ... 29 6.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 24 6.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 24 6.7
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 533 GGGGGGGXXXXPPPPXKXXKP 471
GGGGGGG PPPP P
Sbjct: 31 GGGGGGGDAAPPPPPPADAAP 51
Score = 30.3 bits (65), Expect = 2.7
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +3
Query: 468 GGFXXFXXGGGGXXXXPPPPPP 533
GG GGGG PPPPPP
Sbjct: 25 GGGGYSGGGGGGGDAAPPPPPP 46
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 468 GGFXXFXXGGGGXXXXPPPPPP 533
GG + GGGG PPPPP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPP 45
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 31.1 bits (67), Expect = 1.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 473 VFXFFXGGGGXXXXPPPPPP 532
+F GGGG PPPPPP
Sbjct: 17 LFNLLGGGGGGCCAPPPPPP 36
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPPXXG 542
GGGG PPPPPP G
Sbjct: 23 GGGGGCCAPPPPPPCGG 39
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPPXXG 542
GGGG PPPPPP G
Sbjct: 23 GGGGCGCAPPPPPPPCG 39
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPPXXG 542
GGGG PPPPPP G
Sbjct: 23 GGGGCGCAPPPPPPPCG 39
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPPXXG 542
GGGG PPPPPP G
Sbjct: 23 GGGGCGCAPPPPPPPCG 39
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 533 GGGGGGGXXXXPPPPXKXXKP 471
GGGGGGG P PP KP
Sbjct: 632 GGGGGGGPTGPPAPPKPPAKP 652
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.7 bits (66), Expect = 2.0
Identities = 27/79 (34%), Positives = 27/79 (34%), Gaps = 5/79 (6%)
Frame = +3
Query: 6 PPGGLXGKXSXXKXP-----PWXXGPLTXGVXKTPXIXGXPLLGXXPGXKXFNWPXWGXP 170
PPG S P P GP G P G P G PG F P G P
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGG--PGG--FGPPPPGGP 441
Query: 171 XXLXPPXXGFLGXGNPPRG 227
PP GF G PP G
Sbjct: 442 GAYGPPPTGFPPVGAPPPG 460
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 533 GGGGGGGXXXXPPPPXKXXKP 471
GGGGGGG P PP KP
Sbjct: 632 GGGGGGGPTGPPAPPKPPAKP 652
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 533 GGGGGGGXXXXPPPP 489
GGGGGGG PPPP
Sbjct: 34 GGGGGGGGCCAPPPP 48
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1
Query: 533 GGGGGGGXXXXPPPP 489
GGGGGGG PPPP
Sbjct: 35 GGGGGGGCCAPPPPP 49
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPPXXG 542
GGGG PPPPPP G
Sbjct: 37 GGGGGCCAPPPPPPVCG 53
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 30.7 bits (66), Expect = 2.0
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 492 GGGGXXXXPPPPPPXXG 542
GGGG PPPPPP G
Sbjct: 23 GGGGCGCAPPPPPPACG 39
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/72 (29%), Positives = 26/72 (36%)
Frame = -2
Query: 217 GFPXPKNPXXGGFNXXGXPQXGQLKXFXPGXXPKRGYPXIXGVXKTPXVRGPKXQGGXFX 38
G P P P G G P GQ PG + GYP + G+ P + G G +
Sbjct: 994 GQPGPVGPP-GDDGYPGAP--GQDIYGPPGQAGQDGYPGLDGLPGAPGLNGEPGSPGQYG 1050
Query: 37 XEXFPXRPPGGG 2
P P G
Sbjct: 1051 MPGLPGGPGESG 1062
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/72 (29%), Positives = 26/72 (36%)
Frame = -2
Query: 217 GFPXPKNPXXGGFNXXGXPQXGQLKXFXPGXXPKRGYPXIXGVXKTPXVRGPKXQGGXFX 38
G P P P G G P GQ PG + GYP + G+ P + G G +
Sbjct: 1251 GQPGPVGPP-GDDGYPGAP--GQDIYGPPGQAGQDGYPGLDGLPGAPGLNGEPGSPGQYG 1307
Query: 37 XEXFPXRPPGGG 2
P P G
Sbjct: 1308 MPGLPGGPGESG 1319
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 29.9 bits (64), Expect = 3.5
Identities = 21/72 (29%), Positives = 26/72 (36%)
Frame = -2
Query: 217 GFPXPKNPXXGGFNXXGXPQXGQLKXFXPGXXPKRGYPXIXGVXKTPXVRGPKXQGGXFX 38
G P P P G G P GQ PG + GYP + G+ P + G G +
Sbjct: 1250 GQPGPVGPP-GDDGYPGAP--GQDIYGPPGQAGQDGYPGLDGLPGAPGLNGEPGSPGQYG 1306
Query: 37 XEXFPXRPPGGG 2
P P G
Sbjct: 1307 MPGLPGGPGESG 1318
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 29.9 bits (64), Expect = 3.5
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -2
Query: 133 PGXXPKRGYPXIXGVXKTPXVRGPKXQGGXFXXEXFPXRPPG 8
PG RGYP G TP GPK G P PPG
Sbjct: 194 PGDKGSRGYPGESGEPGTPGSAGPKGNAGPAG----PPGPPG 231
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 29.9 bits (64), Expect = 3.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 542 PXXGGGGGGGXXXXPPPPXKXXKP 471
P GGGGGG PPPP P
Sbjct: 20 PSAGGGGGGCGCGAPPPPPACAPP 43
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 4.6
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 468 GGFXXFXXGGGGXXXXPPPPPPXXG 542
GG GGG PPPPPP G
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPYGG 220
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.1 bits (62), Expect = 6.1
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 492 GGGGXXXXPPPPPP 533
GGGG PPPPPP
Sbjct: 23 GGGGCGCAPPPPPP 36
>AF016446-2|AAC24165.1| 70|Caenorhabditis elegans Hypothetical
protein C02E7.6 protein.
Length = 70
Score = 29.1 bits (62), Expect = 6.1
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 483 FXXGGGGXXXXPPPPPPXXG 542
F GGGG PPPPP G
Sbjct: 19 FPSGGGGGCGCAPPPPPACG 38
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 533 GGGGGGGXXXXPPP 492
GGG GGG PPP
Sbjct: 63 GGGCGGGGGCAPPP 76
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 542 PXXGGGGGGG 513
P GGGGGGG
Sbjct: 23 PSAGGGGGGG 32
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 24.2 bits (50), Expect(2) = 6.7
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 533 GGGGGGGXXXXPPP 492
GGG GGG PPP
Sbjct: 63 GGGCGGGGGCAPPP 76
Score = 23.0 bits (47), Expect(2) = 6.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 542 PXXGGGGGGG 513
P GGGGGGG
Sbjct: 23 PSAGGGGGGG 32
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,894,839
Number of Sequences: 27780
Number of extensions: 181260
Number of successful extensions: 2855
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1577
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3099034026
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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