Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_L18
         (1290 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        33   3.0  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     33   3.0  

>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 17/54 (31%), Positives = 17/54 (31%)
 Frame = +2

Query: 878  PXPXXXAVXVPXXXXXXPXPAXAXXSVDPXVXXXPRXPKXPPXPQRXPXXAPXP 1039
            P P       P      P P  A  S  P V   P  P  PP P   P   P P
Sbjct: 95   PTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 148


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 32.7 bits (71), Expect = 3.0
 Identities = 17/54 (31%), Positives = 17/54 (31%)
 Frame = +2

Query: 878  PXPXXXAVXVPXXXXXXPXPAXAXXSVDPXVXXXPRXPKXPPXPQRXPXXAPXP 1039
            P P       P      P P  A  S  P V   P  P  PP P   P   P P
Sbjct: 640  PTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSP 693


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.141    0.493 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,689,345
Number of Sequences: 237096
Number of extensions: 2067089
Number of successful extensions: 11295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9979
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18550579510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)