Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L16
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.042
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.23
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 0.91
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.6
07_01_0080 + 587674-588510 30 2.8
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 30 2.8
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 2.8
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 24 3.4
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 29 4.9
06_03_1310 + 29238644-29240260 29 6.4
05_04_0011 + 17139322-17139451,17139552-17140174 29 6.4
07_03_1147 + 24349811-24350161,24351031-24351366,24353260-243533... 28 8.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 8.5
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 28 8.5
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 25 9.5
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.9 bits (79), Expect = 0.042
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +1
Query: 424 PXXGXXPPXPXXGXXXXFXFXXXXGPPPGGXTXXPPPXXXXKKKXPPPP 570
P G PP P G PPP G + PPP KK PPPP
Sbjct: 340 PPKGPPPPPPAKGPPPP--------PPPKGPSPPPPPPPGGKKGGPPPP 380
Score = 31.9 bits (69), Expect = 0.69
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 500 PPRGGXPXXPPPXXXXKKKXPPPP 571
PP+G P PPP K PPPP
Sbjct: 358 PPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -1
Query: 847 PXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPP 701
P PPPP A PPP G PP PPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPP 570
PPP PPP K PPPP
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPP 340
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -2
Query: 477 KXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXFFPXGGGXXPP 304
K PP G PPPPP P PP P GG PP
Sbjct: 333 KAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +2
Query: 197 PPPPXKXKXGEXXXXXXKKLXXXPPPPLF*KXXKXXGGXXPPPXGK 334
PPPP K K PPPP G PPP K
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPK 360
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +3
Query: 672 PGPXXQX--KXPGGGXXGGXYXXXAXFXPXASGGGXASPXXXXXXPXGXXSXXXXGGGGX 845
PGP + PGGG GG P A GGG A P G GGGG
Sbjct: 98 PGPLGGGGARPPGGGGGGGP----PSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGG 153
Query: 846 G 848
G
Sbjct: 154 G 154
Score = 28.7 bits (61), Expect = 6.4
Identities = 34/127 (26%), Positives = 35/127 (27%), Gaps = 9/127 (7%)
Frame = +3
Query: 495 GXPPGGXDXXXP-------PPGXXKKKXPP--PPXXXXXXXXXXXXXXXGGGXXPXXXXX 647
G PPGG P PPG PP PP GGG
Sbjct: 89 GLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAP---- 144
Query: 648 XRXXXXPXPGPXXQXKXPGGGXXGGXYXXXAXFXPXASGGGXASPXXXXXXPXGXXSXXX 827
R G + PGGG G A P GGG P G
Sbjct: 145 -RRVLGGGGGGGALARPPGGGRGG------ALGRPPGGGGGGGGPGRAPGGGGGGGGPGR 197
Query: 828 XGGGGXG 848
GGG G
Sbjct: 198 APGGGGG 204
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 0.91
Identities = 20/76 (26%), Positives = 22/76 (28%)
Frame = -1
Query: 841 PPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPPGXLXWXXGPGXGX 662
PP P P G PP A A PP PPP + GPG
Sbjct: 19 PPQPPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQ 78
Query: 661 XXXRXXXXXLGXXPPP 614
+ PPP
Sbjct: 79 QQQPPPPPQMYYQPPP 94
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 442 PPXPXXGXXXXFXFXXXXGPPPGGXTXXPPPXXXXKKKXPPPP 570
PP P G GP P PPP + PPPP
Sbjct: 55 PPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPP 97
Score = 28.3 bits (60), Expect = 8.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 500 PPRGGXPXXPPPXXXXKKKXPPPP 571
PP+GG P PPP PPPP
Sbjct: 13 PPQGGFPPQPPP---MNPYGPPPP 33
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = -2
Query: 513 PPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXF 334
PP PP APPPPP KK PP PP
Sbjct: 718 PPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGT 777
Query: 333 FP 328
P
Sbjct: 778 VP 779
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 442 PPXPXXGXXXXFXFXXXXGPPPGGXTXXPPPXXXXKKKXPPPP 570
PP P G F PPP + P K PPPP
Sbjct: 651 PPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPP 693
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = -1
Query: 847 PXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPP 701
P PPPP P G G PPP P PPP
Sbjct: 666 PPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPP 714
>07_01_0080 + 587674-588510
Length = 278
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 500 PPRGGXPXXPPPXXXXKKKXPPPP 571
PP G P PPP PPPP
Sbjct: 98 PPSSGSPPPPPPPPPPPPPPPPPP 121
Score = 28.3 bits (60), Expect = 8.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPP 570
PPP + PPP PPPP
Sbjct: 97 PPPSSGSPPPPPPPPPPPPPPPPP 120
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPP 570
PPP T PPP + + PPPP
Sbjct: 50 PPPQPHTAPPPPPPNAEPEAPPPP 73
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 2.8
Identities = 36/147 (24%), Positives = 39/147 (26%), Gaps = 10/147 (6%)
Frame = +1
Query: 433 GXXPPXPXXGXXXXFXFXXXXGPPPGGXTXXPPP---XXXXKKKXPPPPXXXXXXXXXPX 603
G PP P G PPPGG T PPP + PP P P
Sbjct: 1096 GVAPPPPSIGAGAP-----PPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPP 1150
Query: 604 XXXXGXXXXPXXXXXXAXXXPXSXAPXT-------XXKXRGGXXXGGXTXXXXXFXPXXP 762
G P A + P RG GG P P
Sbjct: 1151 PPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMP 1210
Query: 763 GGXXRLPXXXXXPPXGXXXXXGXGGGG 843
G +P PP G GG G
Sbjct: 1211 PG---VPGGPPPPPGGRGLPAPPGGRG 1234
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 500 PPRGGXPXXPPPXXXXKKKXPPPP 571
PPR P PPP PPPP
Sbjct: 49 PPR---PPPPPPPPTQPAPPPPPP 69
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 665 PXPXPPXPXQXPGGGXXXGG 724
P P PP P + GGG G
Sbjct: 62 PAPPPPPPARSGGGGGSDDG 81
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/54 (33%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = -1
Query: 769 PPPXAXGXXXAXXX*XPPXXPPPG--XLXWXXGPGXGXXXXRXXXXXLGXXPPP 614
PPP A A PP PPP GPG G G PPP
Sbjct: 333 PPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPP 386
>06_03_1310 + 29238644-29240260
Length = 538
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 500 PPRGGXPXXPPPXXXXKKKXPPPP 571
PPR P PPP PPPP
Sbjct: 390 PPRRTPPTPPPPSSPTPSHLPPPP 413
>05_04_0011 + 17139322-17139451,17139552-17140174
Length = 250
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = -3
Query: 839 PPPXPXXXXXPXGGXXXXXGRRXXPPGXXGXKXXXXXVXPPXXXPP 702
PPP P P GG G+R P G PP P
Sbjct: 67 PPPPPPPPSPPNGGNVIGNGKRLTPTGPDPIHNEFQPPPPPPPPSP 112
>07_03_1147 +
24349811-24350161,24351031-24351366,24353260-24353376,
24353585-24353647,24354066-24354139,24354216-24354306,
24354791-24354850,24355270-24355462,24356242-24356522,
24357435-24357536,24357664-24357774,24358410-24358475,
24358562-24358660,24358757-24358788,24359171-24359274,
24359380-24359507,24359625-24359756,24360051-24360359,
24360887-24361071,24361161-24361263,24361407-24361552,
24361748-24361827,24361901-24362103
Length = 1121
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPP 570
PPP T PPP PPPP
Sbjct: 47 PPPPQPTLPPPPPRTLPPPPPPPP 70
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPP 570
PPP PPP K PPPP
Sbjct: 354 PPPPPPPPPPPPKLNTAPKPPPPP 377
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 28.3 bits (60), Expect = 8.5
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPP 570
PPP T PPP PPPP
Sbjct: 437 PPPPESTSPPPPPTSDPPPVPPPP 460
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 25.4 bits (53), Expect(2) = 9.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 503 PRGGXPXXPPPXXXXKKKXPPPP 571
PRG PPP PPPP
Sbjct: 133 PRGPGQEPPPPHVPKAAPPPPPP 155
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 665 PXPXPPXPXQXPG 703
P P PP P PG
Sbjct: 151 PPPPPPPPHAPPG 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,857,921
Number of Sequences: 37544
Number of extensions: 717533
Number of successful extensions: 3349
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2356
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -