Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L16
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 35 0.087
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 35 0.087
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 35 0.087
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.27
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.27
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.35
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.35
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.3
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.3
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 7.6
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 7.6
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 28 7.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/89 (26%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +1
Query: 313 PPPPPXKKXGGXFXKXGGXXXKXXXXXXXXXXXXXXXPXXGXXPPXPXXGXXXXFXFXXX 492
P PPP K G P G PP P G
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 493 XGPPPGG---XTXXPPPXXXXKKKXPPPP 570
PPPGG + PPP PPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 395 PXXGGGGGAXXXXXXXPPXXXGGXXXXFXFXXXXXPPRGGXPXXPPPXXXXKKKXPPPP 571
P GG PP GG PP GG P PPP K PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = -2
Query: 531 GGXXGXPPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFX 352
GG PP GG PP GG PPPPP G PP
Sbjct: 724 GGPPPPPPPGGLPPIT---GGPPPPPPPGGLPPISGGPPPPPPPPG-------GCPPPPP 773
Query: 351 KXPPXFFPXGGGXXPP 304
PP F G PP
Sbjct: 774 PPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 501 PPGGXDXXXPPP--GXXKKKXPPPP 569
PPGG PPP G K PPPP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/89 (26%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +1
Query: 313 PPPPPXKKXGGXFXKXGGXXXKXXXXXXXXXXXXXXXPXXGXXPPXPXXGXXXXFXFXXX 492
P PPP K G P G PP P G
Sbjct: 684 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 743
Query: 493 XGPPPGG---XTXXPPPXXXXKKKXPPPP 570
PPPGG + PPP PPPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 395 PXXGGGGGAXXXXXXXPPXXXGGXXXXFXFXXXXXPPRGGXPXXPPPXXXXKKKXPPPP 571
P GG PP GG PP GG P PPP K PPP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = -2
Query: 531 GGXXGXPPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFX 352
GG PP GG PP GG PPPPP G PP
Sbjct: 724 GGPPPPPPPGGLPPIT---GGPPPPPPPGGLPPISGGPPPPPPPPG-------GCPPPPP 773
Query: 351 KXPPXFFPXGGGXXPP 304
PP F G PP
Sbjct: 774 PPPPGGFKGGPPPPPP 789
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 501 PPGGXDXXXPPP--GXXKKKXPPPP 569
PPGG PPP G K PPPP
Sbjct: 764 PPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.7 bits (76), Expect = 0.087
Identities = 24/89 (26%), Positives = 25/89 (28%), Gaps = 3/89 (3%)
Frame = +1
Query: 313 PPPPPXKKXGGXFXKXGGXXXKXXXXXXXXXXXXXXXPXXGXXPPXPXXGXXXXFXFXXX 492
P PPP K G P G PP P G
Sbjct: 267 PLPPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP 326
Query: 493 XGPPPGG---XTXXPPPXXXXKKKXPPPP 570
PPPGG + PPP PPPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 33.1 bits (72), Expect = 0.27
Identities = 19/59 (32%), Positives = 19/59 (32%)
Frame = +2
Query: 395 PXXGGGGGAXXXXXXXPPXXXGGXXXXFXFXXXXXPPRGGXPXXPPPXXXXKKKXPPPP 571
P GG PP GG PP GG P PPP K PPP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 32.3 bits (70), Expect = 0.47
Identities = 24/76 (31%), Positives = 24/76 (31%)
Frame = -2
Query: 531 GGXXGXPPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFX 352
GG PP GG PP GG PPPPP G PP
Sbjct: 307 GGPPPPPPPGGLPPIT---GGPPPPPPPGGLPPISGGPPPPPPPPG-------GCPPPPP 356
Query: 351 KXPPXFFPXGGGXXPP 304
PP F G PP
Sbjct: 357 PPPPGGFKGGPPPPPP 372
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 501 PPGGXDXXXPPP--GXXKKKXPPPP 569
PPGG PPP G K PPPP
Sbjct: 347 PPGGCPPPPPPPPPGGFKGGPPPPP 371
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 462 PPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXFFPXGGGXXPP 304
PP G +PPPPP G PP P P GG PP
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 31.5 bits (68), Expect = 0.81
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -2
Query: 519 GXPP-RGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXP 343
G PP G PP G +PPPPP G PP P
Sbjct: 245 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPP 302
Query: 342 PXFFPXGGGXXPP 304
P P G PP
Sbjct: 303 PRGSPPTGSLPPP 315
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 859 GXXXPXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPP 701
G P PPP G + PPP A G PP PPP
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 303
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -2
Query: 513 PPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXF 334
PPR G PP PPPPP G PP PP
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPP-- 322
Query: 333 FPXGGGXXPP 304
P G G PP
Sbjct: 323 -PAGTGSPPP 331
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 462 PPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXFFPXGGGXXPP 304
PP G +PPPPP G PP P P GG PP
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 31.5 bits (68), Expect = 0.81
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -2
Query: 519 GXPP-RGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXP 343
G PP G PP G +PPPPP G PP P
Sbjct: 266 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPP 323
Query: 342 PXFFPXGGGXXPP 304
P P G PP
Sbjct: 324 PRGSPPTGSLPPP 336
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 859 GXXXPXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPP 701
G P PPP G + PPP A G PP PPP
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 324
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -2
Query: 513 PPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXF 334
PPR G PP PPPPP G PP PP
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPP-- 343
Query: 333 FPXGGGXXPP 304
P G G PP
Sbjct: 344 -PAGTGSPPP 352
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.27
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -2
Query: 462 PPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXFFPXGGGXXPP 304
PP G +PPPPP G PP P P GG PP
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 31.5 bits (68), Expect = 0.81
Identities = 21/73 (28%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = -2
Query: 519 GXPP-RGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXP 343
G PP G PP G +PPPPP G PP P
Sbjct: 251 GSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPP 308
Query: 342 PXFFPXGGGXXPP 304
P P G PP
Sbjct: 309 PRGSPPTGSLPPP 321
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 859 GXXXPXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPP 701
G P PPP G + PPP A G PP PPP
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPP 309
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = -2
Query: 513 PPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXKXPPXF 334
PPR G PP PPPPP G PP PP
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG-SLPPPQAGGSPP-- 328
Query: 333 FPXGGGXXPP 304
P G G PP
Sbjct: 329 -PAGTGSPPP 337
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 3/85 (3%)
Frame = -1
Query: 859 GXXXPXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPPGXLXWXX 680
G P PPPP P PPP + G PP PPPG
Sbjct: 258 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW------PPPPPPPPGRTPGPP 311
Query: 679 G-PG--XGXXXXRXXXXXLGXXPPP 614
G PG R +G PPP
Sbjct: 312 GMPGMPPPPPPSRFGPPGMGGMPPP 336
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -2
Query: 528 GXXGXPPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXK 349
G G PP PP G PPPPP PP
Sbjct: 312 GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 371
Query: 348 XPPXFFPXGGGXXPP 304
P P G G PP
Sbjct: 372 PAP---PSGHGMIPP 383
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/85 (29%), Positives = 27/85 (31%), Gaps = 3/85 (3%)
Frame = -1
Query: 859 GXXXPXPPPPXXXXXXXPXGXXXXXXGDAXPPPXAXGXXXAXXX*XPPXXPPPGXLXWXX 680
G P PPPP P PPP + G PP PPPG
Sbjct: 268 GQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMW------PPPPPPPPGRTPGPP 321
Query: 679 G-PG--XGXXXXRXXXXXLGXXPPP 614
G PG R +G PPP
Sbjct: 322 GMPGMPPPPPPSRFGPPGMGGMPPP 346
Score = 28.3 bits (60), Expect = 7.6
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = -2
Query: 528 GXXGXPPRGGXXXXXKXKXXXXPPXXXGGXXXXXXXAPPPPPXXGXKKKXFXXXPPXFXK 349
G G PP PP G PPPPP PP
Sbjct: 322 GMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRP 381
Query: 348 XPPXFFPXGGGXXPP 304
P P G G PP
Sbjct: 382 PAP---PSGHGMIPP 393
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.5
Identities = 42/189 (22%), Positives = 45/189 (23%), Gaps = 4/189 (2%)
Frame = +1
Query: 307 GXPPPPPXKKXGGXFXKXGGXXXKXXXXXXXXXXXXXXXPXXGXXPPXPXXGXXXXFXFX 486
G PP P + GG P G P G
Sbjct: 295 GPPPSGPPSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPPQ 354
Query: 487 XXXGPPPGGXTXXPPPXXXXKKKXPPPPXXXXXXXXXPXXXXXGXXXXPXXXXXXAXXXP 666
P P PPP PPP P G P P
Sbjct: 355 QFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPP 414
Query: 667 XS-XAPXTXXKXRGGXXXGGXTXXXXXFXPXXPGGXXRL-PXXXXXPPXGXXXXXGXG-- 834
AP + +GG GG F P PGG P PP G G
Sbjct: 415 GGPGAPGSYGPPQGG--PGG-------FGPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAP 465
Query: 835 GGGXXXRHP 861
GG R P
Sbjct: 466 GGNPFARGP 474
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 496 GPPPGGXTXXPPPXXXXKKKXPPPP 570
GPP GG PPP PPPP
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPP 696
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 496 GPPPGGXTXXPPPXXXXKKKXPPPP 570
GPP GG PPP PPPP
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPP 696
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 702 GGGXXGGXYXXXAXFXPXASGGGXASPXXXXXXPXGXXSXXXXGGGGXG 848
GG GG Y GGG + P G GGGG G
Sbjct: 194 GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSG 242
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.7
Identities = 15/49 (30%), Positives = 16/49 (32%)
Frame = +3
Query: 702 GGGXXGGXYXXXAXFXPXASGGGXASPXXXXXXPXGXXSXXXXGGGGXG 848
GG GG Y GGG + P G GGGG G
Sbjct: 194 GGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSG 242
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 7.6
Identities = 22/90 (24%), Positives = 23/90 (25%)
Frame = +1
Query: 499 PPPGGXTXXPPPXXXXKKKXPPPPXXXXXXXXXPXXXXXGXXXXPXXXXXXAXXXPXSXA 678
PPP G PPP PPPP P P A P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRPKT 134
Query: 679 PXTXXKXRGGXXXGGXTXXXXXFXPXXPGG 768
P + G G T F GG
Sbjct: 135 PVNPALAKLGGKNPG-TVDRGEFLKGIQGG 163
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 305 GGXXPPPXGKKXGGXXXKXGGXXXKXFFFXPXXGGGGGA 421
GG PPP G GG GG F GGGGA
Sbjct: 278 GGAPPPPSGSAMGGGG--GGGATSAYFGVGSGAMGGGGA 314
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +2
Query: 305 GGXXPPPXGKKXGGXXXKXGGXXXKXFFFXPXXGGGGGA 421
GG PPP G GG GG F GGGGA
Sbjct: 172 GGAPPPPSGSAMGGGG--GGGATSAYFGVGSGAMGGGGA 208
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,514,416
Number of Sequences: 27780
Number of extensions: 395829
Number of successful extensions: 1740
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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