Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L14
(822 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 34 0.16
07_03_1747 + 29188568-29188715,29188793-29189541 31 1.5
12_01_0841 - 7873458-7874225 30 1.9
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 1.9
10_08_0213 - 15912048-15912716 30 2.6
12_01_0524 - 4167867-4168445 29 3.4
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 5.9
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 5.9
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.9
06_01_0690 + 5033943-5034740 29 5.9
12_02_0299 - 17051570-17052474,17053542-17053755 28 7.8
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 7.8
08_01_0059 - 394001-394708 28 7.8
07_03_1400 + 26287124-26287298,26287925-26288007,26288141-262882... 28 7.8
07_01_0479 + 3606663-3607448 28 7.8
04_01_0530 - 6928528-6929500,6929514-6930964 28 7.8
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 7.8
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 7.8
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 316 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVGG 152
H P AAA P VP++ P L + S GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/51 (37%), Positives = 27/51 (52%)
Frame = +3
Query: 369 PPPGTTLSAPVYLITAPSPG*SAWTLALQFLCS*TIGPTTCRLARSSSVLG 521
PPP TT++ V L TA + S + QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>12_01_0841 - 7873458-7874225
Length = 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPGKXXGT 662
GGG G G G G GG QG GGG G+ G+
Sbjct: 189 GGGGGQGGGNGSGYGSGYGSGYGQGGGVHAGGYGQGGGGGGGGGQGGGS 237
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPGKXXG 665
GGG G G G G GG QG GGG G+ G
Sbjct: 111 GGGGGQGGGAGSGYGSGYGSGYGQGRGASGGGYGQGGGGGGGGGQGGG 158
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPGKXXG 665
GGG G G G G GG QG GGG G+ G
Sbjct: 150 GGGGGQGGGNGSGYGSGYGSGYGQGGGASGGGYGQGGGGGGGGGQGGG 197
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPGKXXG 665
GGG G G G G GG +G GGG G+ G
Sbjct: 72 GGGGGGGGGQGGGSGSGYGSGYGQGGGASGGGYGKGGGGGGGGGQGGG 119
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/51 (31%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +3
Query: 666 PXXFPGXAPPPXPWXXPPXSXXX---PGPXSRXXXXXXPXTXXXPXXXPPP 809
P F PPP P PP PGP + P P PPP
Sbjct: 48 PPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPP 98
>10_08_0213 - 15912048-15912716
Length = 222
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/49 (32%), Positives = 18/49 (36%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPGKXXGT 662
GGG G G R G G GG G GGG G+ G+
Sbjct: 155 GGGGGQGGGYGSGSGYGSGRGYGQGGGAYGGGYASGGGGGGGGGQGGGS 203
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPGKXXGT 662
GGG G G G G GG G GGG G+ G+
Sbjct: 41 GGGGSGGGGGYGGSGYGSGSGYGEGGGAGAGGYGHGGGGGGGGGEGGGS 89
>12_01_0524 - 4167867-4168445
Length = 192
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -3
Query: 313 QPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVR 134
QPS+AA P + + + + YSH G + S + G + G GGG P V
Sbjct: 104 QPSSAAVAPLPSSTNLKSAVRSAMGSYSHSGTRRVHFGDSTVLG--EKAAGAGGGEPAV- 160
Query: 133 CEERVDHEGQ*C 98
EE + E + C
Sbjct: 161 VEEVEEEEEKEC 172
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 214 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 330
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/51 (29%), Positives = 16/51 (31%)
Frame = +3
Query: 657 AXVPXXFPGXAPPPXPWXXPPXSXXXPGPXSRXXXXXXPXTXXXPXXXPPP 809
A P P PPP P PP P P + P PPP
Sbjct: 72 APPPPQTPPSPPPPPPPPPPPPPPLSPTPTTTSWTTNSSSISASPILPPPP 122
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 690 PPPXPWXXPPXSXXXPGPXSRXXXXXXPXTXXXPXXXPPPXXR 818
PPP P PP P S P P PPP R
Sbjct: 350 PPPQPSHLPPLPPRPPTMPSMQPDMLAPGVPRFPPPPPPPDTR 392
>06_01_0690 + 5033943-5034740
Length = 265
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = -3
Query: 808 GGGXXXGXXXVXGXXXXXXRDXGPGXXXEXGGXXQGXGGGAXPG 677
GGG G G + GPG GG G GGG G
Sbjct: 40 GGGSGNGSGWGSGSGSGYGQASGPGGYASGGGGGGGGGGGGGNG 83
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +3
Query: 663 VPXXFPGXAPPPXPWXXPPXSXXXPGP 743
+P +P PPP P PP S P P
Sbjct: 313 LPSFYPSPPPPPPPPPPPPPSFPWPFP 339
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 220 VHRANTGRSSNELDRQTTELERRGVG 297
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +3
Query: 666 PXXFPGXAPPPXPWXXPPXSXXXPGPXSRXXXXXXPXTXXXPXXXPPP 809
P P APPP P PP P P S P T P PPP
Sbjct: 3 PPPPPRRAPPP-PATPPPPPRRAPPPPSPPIRPPPPPT-PRPYAPPPP 48
>07_03_1400 +
26287124-26287298,26287925-26288007,26288141-26288270,
26288369-26288442,26288797-26288883,26288976-26289100,
26289232-26289292,26289606-26289683,26289785-26289890,
26289978-26290123,26290264-26290380
Length = 393
Score = 28.3 bits (60), Expect = 7.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +2
Query: 455 ISMQLDNWPNDMQTCTFKFGSRMXNSDEMD 544
++++ W ND+++C F+ SR +S+ M+
Sbjct: 83 VNLEGGGWCNDVKSCVFRKSSRRGSSNHME 112
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 1/54 (1%)
Frame = +3
Query: 663 VPXXFPG-XAPPPXPWXXPPXSXXXPGPXSRXXXXXXPXTXXXPXXXPPPXXRG 821
VP FPG PPP P+ P P R P P PPP G
Sbjct: 193 VPPAFPGGPPPPPGPFMRGPPPMGP--PQVRPGMPGGPPPGMRPGMPPPPFRPG 244
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 49 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 189
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 398 GRGERSPRRWLQPRLAVPRQASTSVPRTP 312
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 395 RGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNS 273
R RSPRR P R + + R+PA S +P+R++S
Sbjct: 224 RDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,803,498
Number of Sequences: 37544
Number of extensions: 490902
Number of successful extensions: 2185
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2101
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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