Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_L05
         (814 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    30   1.7  
AC006761-2|AAF60547.1|  402|Caenorhabditis elegans Hypothetical ...    30   1.7  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    29   3.0  
AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical...    29   3.0  
Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical pr...    29   4.0  
AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical ...    29   5.2  
AC024751-12|ABF71717.1|  301|Caenorhabditis elegans Collagen pro...    29   5.2  
Z68012-5|CAA92019.1|  408|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
           protein T20D3.11 protein.
          Length = 1843

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 519 PYASSHPPLRSRLHQPDHQIPDS 587
           P +S HPPL S  H  +H  PD+
Sbjct: 66  PTSSHHPPLNSSSHHSNHNYPDT 88


>AC006761-2|AAF60547.1|  402|Caenorhabditis elegans Hypothetical
           protein Y41G9A.5 protein.
          Length = 402

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 527 IKPPSPAISATSTRSSNPRFHTPTTPD-LTSISINPLTPV 643
           +   SPAI +T+T +++P+  T  TP+ +T++    + PV
Sbjct: 266 VSSDSPAIESTTTTTASPKTSTTLTPEPITTVPAKDVKPV 305


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPVLKXVRAGV 667
           P+P  + T+T  +NP   TPTT   TS   N ++P L  +   +
Sbjct: 490 PTPVPTTTNTPPANPTTATPTTVG-TSKQTNTISPHLSTITGSI 532


>AL132862-11|CAB60541.1|  396|Caenorhabditis elegans Hypothetical
           protein Y73F8A.16 protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
           F  L F++TG E KS  V + S+    +I  GYR+
Sbjct: 37  FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71


>Z70213-6|CAA94176.1|  167|Caenorhabditis elegans Hypothetical
           protein ZK930.7 protein.
          Length = 167

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 530 KPPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPVLK 649
           KPP+P+     T   N   + P++P  T  S  PLT + K
Sbjct: 101 KPPAPSARTPPTIYENLAINAPSSPSATDASSVPLTFIEK 140


>AF100656-3|AAF99968.1|  265|Caenorhabditis elegans Hypothetical
           protein F49F1.1 protein.
          Length = 265

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +2

Query: 536 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPVLK 649
           P+   S ++  +  P   T  TP+LT++++ P+T  LK
Sbjct: 160 PATCGSCSNGTTGVPLVLTTLTPELTTVTVEPITSTLK 197


>AC024751-12|ABF71717.1|  301|Caenorhabditis elegans Collagen
           protein 47 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -2

Query: 639 GVSGLMEMDVKSGVVGVWNRGFDDRVDVAEIAGEGGLMHKGETANSNARG*RGG 478
           G  GL   D   G  G    G  D V +  + G+ G   +GE  N  ++G RGG
Sbjct: 167 GPPGLAGQDGLDGAPGEPGVGGMDAVKIVSVDGKIG--RRGEAGNKGSKGSRGG 218


>Z68012-5|CAA92019.1|  408|Caenorhabditis elegans Hypothetical
           protein T24D5.5 protein.
          Length = 408

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 639 GVSGLMEMDVKSGVVGVWNRGFDDRVDVAEIA 544
           G S L  M+ +S ++  W R  DDRV+    A
Sbjct: 323 GSSSLSNMNAQSSLMVCWKRSTDDRVNAQRFA 354


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,748,542
Number of Sequences: 27780
Number of extensions: 366340
Number of successful extensions: 1187
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)