Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_L02
(819 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 2e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 45 7e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 45 7e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 45 7e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 45 7e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 45 7e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 7e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 38 1e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 37 3e-04
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 36 6e-04
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 7.8
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 7.8
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 7.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.8
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.4 bits (120), Expect = 5e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 91 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 249
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 250 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL-RAR 423
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 424 VSNNGSVSW 450
+ G V W
Sbjct: 127 LHYTGKVLW 135
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 509 DMQTCTFKFGS 541
D QTC KFGS
Sbjct: 155 DQQTCFMKFGS 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 300
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 301 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 453
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 300
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 301 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTXGDYALRARVSNNGSVSWI 453
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 1e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +1
Query: 109 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 267
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 268 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGS 441
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 442 VSW 450
V W
Sbjct: 137 VEW 139
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 509 DMQTCTFKFGS 541
D QTC KFGS
Sbjct: 159 DEQTCVMKFGS 169
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWI 453
G Y V++NGS ++
Sbjct: 85 GTYQTSVVVTHNGSCLYV 102
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Frame = +1
Query: 82 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 240
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 241 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTXGDYAL- 414
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 415 ---RARVSNNGSVSW 450
+A + + G V W
Sbjct: 121 IMTKAILHHTGKVVW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 47.2 bits (107), Expect = 2e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +1
Query: 136 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 300
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSW 450
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 4e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 136 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTXGDYALRARVSNNGSVSW 450
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 509 DMQTCTFKFGS 541
D QTC KFGS
Sbjct: 163 DEQTCVLKFGS 173
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 45.2 bits (102), Expect = 7e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWI 453
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 45.2 bits (102), Expect = 7e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWI 453
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 45.2 bits (102), Expect = 7e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWI 453
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 45.2 bits (102), Expect = 7e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWI 453
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 45.2 bits (102), Expect = 7e-07
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 226 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTX 399
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 400 GDYALRARVSNNGSVSWI 453
G Y V+++GS ++
Sbjct: 85 GTYQTSVVVTHDGSCLYV 102
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 7e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +1
Query: 109 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 273
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 274 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 375
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 44.8 bits (101), Expect = 1e-06
Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 7/129 (5%)
Frame = +1
Query: 88 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 252
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 253 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTXGDYALRARV 426
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 427 SNNGSVSWI 453
NNG+ ++
Sbjct: 131 KNNGTCLYV 139
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 33/134 (24%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 282
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 283 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TXGDYALRARVSNNGSVSWI 453
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 454 KRLDI--GTPISMQ 489
RL I G P++++
Sbjct: 122 SRLTIKAGCPMNLE 135
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 491 LDNWXNDMQTCTFKFGS 541
L+N+ D Q C +FGS
Sbjct: 134 LENFPMDTQRCPLQFGS 150
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +1
Query: 190 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 366
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 367 VVLLNAAATTXGDYALRAR--VSNNGSVSWI 453
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +1
Query: 187 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 360
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 361 PDVVLLNAAATTXGDYALRAR----VSNNGSVSWI 453
PD+VL N A G+Y +R + + NG V W+
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 509 DMQTCTFKFGS 541
D QTC KFGS
Sbjct: 161 DQQTCIMKFGS 171
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.6 bits (98), Expect = 2e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 136 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 300
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 301 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTXGDYAL----RARVSNNGSVSW 450
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 37.5 bits (83), Expect = 1e-04
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +1
Query: 124 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 288
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 289 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTXGDYAL---RARVSNNGSVSWIKR 459
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 460 LDIGTPISMQVR 495
L I M++R
Sbjct: 156 LTIKAKCPMELR 167
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 36.7 bits (81), Expect = 3e-04
Identities = 35/153 (22%), Positives = 68/153 (44%), Gaps = 13/153 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTXGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 436 GSVSWIKRLDIGTPISMQVRQLXQRHADLHVQV 534
GS++ RL I M ++ H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 35.5 bits (78), Expect = 6e-04
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 13/153 (8%)
Frame = +1
Query: 115 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 282
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 283 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTXGDYALRARVSNN 435
D RL++ G T V SE +W PD +N ATT ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 436 GSVSWIKRLDIGTPISMQVRQLXQRHADLHVQV 534
GS++ RL I M ++ H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 109 YKKLQYYNIINIEQIPVPV 127
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 7.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -1
Query: 57 YKSSTFYDN*SIEAIPTPV 1
YK +Y+ +IE IP PV
Sbjct: 105 YKKLQYYNIINIEQIPVPV 123
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 333 PSAAAPFPCVPTQS 292
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,914
Number of Sequences: 438
Number of extensions: 4289
Number of successful extensions: 86
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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