Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_K07
         (756 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M24070-1|AAA35750.1|  364|Homo sapiens protein ( Human DNA-bindi...    31   3.4  
L28809-1|AAA20871.1|  324|Homo sapiens protein ( Homo sapiens db...    31   3.4  
J03827-1|AAA61308.1|  317|Homo sapiens NFYA protein.                   31   3.4  
BC106045-1|AAI06046.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC098435-1|AAH98435.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC090038-1|AAH90038.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC072014-1|AAH72014.1|  266|Homo sapiens YBX1 protein protein.         31   3.4  
BC071708-1|AAH71708.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC070084-1|AAH70084.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC065571-1|AAH65571.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC038384-1|AAH38384.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC020164-1|AAH20164.1|  181|Homo sapiens YBX1 protein protein.         31   3.4  
BC018393-1|AAH18393.1|  267|Homo sapiens Unknown (protein for IM...    31   3.4  
BC015208-1|AAH15208.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC010430-1|AAH10430.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC002411-1|AAH02411.1|  324|Homo sapiens Y box binding protein 1...    31   3.4  
BC000064-1|AAH00064.1|  266|Homo sapiens YBX1 protein protein.         31   3.4  
AY453840-1|AAR24087.1|  538|Homo sapiens atherin protein.              31   5.9  

>M24070-1|AAA35750.1|  364|Homo sapiens protein ( Human DNA-binding
           protein B (dbpB) gene, 3' end. ).
          Length = 364

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 261 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 298


>L28809-1|AAA20871.1|  324|Homo sapiens protein ( Homo sapiens
           dbpB-like protein mRNA, complete cds. ).
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>J03827-1|AAA61308.1|  317|Homo sapiens NFYA protein.
          Length = 317

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC106045-1|AAI06046.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC098435-1|AAH98435.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC090038-1|AAH90038.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC072014-1|AAH72014.1|  266|Homo sapiens YBX1 protein protein.
          Length = 266

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC071708-1|AAH71708.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC070084-1|AAH70084.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC065571-1|AAH65571.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC038384-1|AAH38384.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC020164-1|AAH20164.1|  181|Homo sapiens YBX1 protein protein.
          Length = 181

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 78  ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 115


>BC018393-1|AAH18393.1|  267|Homo sapiens Unknown (protein for
           IMAGE:3882730) protein.
          Length = 267

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC015208-1|AAH15208.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC010430-1|AAH10430.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC002411-1|AAH02411.1|  324|Homo sapiens Y box binding protein 1
           protein.
          Length = 324

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>BC000064-1|AAH00064.1|  266|Homo sapiens YBX1 protein protein.
          Length = 266

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = -2

Query: 113 ADRLDGSEAGRRVRQ----AARPRLQHGPPRVEPPRSN 12
           AD     E GR VRQ      RPR + GPPR   PR +
Sbjct: 221 ADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPRED 258


>AY453840-1|AAR24087.1|  538|Homo sapiens atherin protein.
          Length = 538

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 19/65 (29%), Positives = 23/65 (35%)
 Frame = -2

Query: 215 PXPXKNKPIGPVSICVSRKGEASAVAAHPVRENRADRLDGSEAGRRVRQAARPRLQHGPP 36
           P P    P  PV+     +   +A AA     +      G  A R    AA P     PP
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPP 188

Query: 35  RVEPP 21
            V PP
Sbjct: 189 AVAPP 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,727,454
Number of Sequences: 237096
Number of extensions: 1079278
Number of successful extensions: 2513
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2436
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9127122082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)