Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_J10
         (830 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       26   0.49 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   0.86 
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.0  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   8.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   8.0  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   8.0  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.8 bits (54), Expect = 0.49
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +3

Query: 492 PSTHYSGNAPQLVPPHGGHQGALRAGPLCAP 584
           PS H S  APQ   P    QG    GP  AP
Sbjct: 25  PSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55



 Score = 23.0 bits (47), Expect = 3.5
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +2

Query: 95  PNPLILPHRGRSPLHPPNQLPSR 163
           PNP   P  G  P  PP+Q PS+
Sbjct: 40  PNPSQGPPPGGPPGAPPSQNPSQ 62


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 25.0 bits (52), Expect = 0.86
 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
 Frame = +3

Query: 291 GGQPGVNQVHGPRAN---SLQPSTQLHPQSLPSALDFVRNHCSNATGAYTAPTIECLCPN 461
           GG    N +   R N   SLQPS   H   L SAL   R+ C ++ G Y + T   L P+
Sbjct: 260 GGNEDANLLLKARLNPNSSLQPSLASHHSHLSSALG--RSAC-HSPGVYPS-TAGFLPPS 315

Query: 462 KITRRGRATPPSTHYSGNAPQLVPPHGGHQGALRAGP 572
               +   +    H  G++P     HG H      GP
Sbjct: 316 YHPHQHHPSQYHPH-RGSSPH--HQHGNHTMGPTMGP 349


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 543 GHQGALRAGP 572
           GHQG  RAGP
Sbjct: 247 GHQGNFRAGP 256


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 543 GHQGALRAGP 572
           GHQG  RAGP
Sbjct: 162 GHQGNFRAGP 171


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 543 GHQGALRAGP 572
           GHQG  RAGP
Sbjct: 481 GHQGNFRAGP 490


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 465 ITRRGRATPPSTHYSGNAPQLVPPHGG 545
           +T      PPS H++ +AP L     G
Sbjct: 507 LTEYHHVAPPSGHHASSAPLLAATLAG 533


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 264 QRCPHHRLHGGQP 302
           Q C HH  H G+P
Sbjct: 568 QACSHHLTHKGKP 580


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 360 HPQSLPSALDFVRNHCSN 413
           H + L   LDFV NH S+
Sbjct: 110 HEKGLKIILDFVPNHTSD 127


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 561 RAGPLCAPLRVRLQISAGVGRXV*GW 638
           + GP C P +  L   AG    V GW
Sbjct: 272 KVGPACLPFQHFLDSFAGSDVTVLGW 297


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 360 HPQSLPSALDFVRNHCSN 413
           H + L   LDFV NH S+
Sbjct: 110 HEKGLKIILDFVPNHTSD 127


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,476
Number of Sequences: 438
Number of extensions: 5219
Number of successful extensions: 21
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)