Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_I19
(845 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 37 3e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.003
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 32 0.008
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.010
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 29 0.041
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 29 0.041
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.22
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.29
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 1.5
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 24 2.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 24 2.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 24 2.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 24 2.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 2.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 24 2.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 24 2.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 2.0
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.5
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 36.7 bits (81), Expect = 3e-04
Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Frame = +3
Query: 45 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 203
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 204 VRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPPGTT 368
+ L+ W D + W+ E+G T P PD+ N A TT
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTT 121
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +3
Query: 63 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 227
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 228 MNWIDKRLSWNAGEW 272
+ W L+W + E+
Sbjct: 88 LMWEQSHLTWKSSEF 102
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +3
Query: 69 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 236
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 237 IDKRLSWNAGE 269
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.008
Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 7/111 (6%)
Frame = +3
Query: 33 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 191
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 192 SESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAA 344
T + ++ W D +L WN ++G P PD+ N A
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.010
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = +3
Query: 90 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 254
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 255 WNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPPGT 365
WN E+G N PD+ N+A GT
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGT 154
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.010
Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Frame = +3
Query: 90 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 254
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 255 WNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPPGT 365
WN E+G N PD+ N+A GT
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGT 154
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 180 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPP 359
++ E + A L++ W+D L WN E+G N PD+ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 360 GT 365
GT
Sbjct: 85 GT 86
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 180 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPP 359
++ E + A L++ W+D L WN E+G N PD+ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 360 GT 365
GT
Sbjct: 85 GT 86
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 180 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPP 359
++ E + A L++ W+D L WN E+G N PD+ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 360 GT 365
GT
Sbjct: 85 GT 86
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 180 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPP 359
++ E + A L++ W+D L WN E+G N PD+ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 360 GT 365
GT
Sbjct: 85 GT 86
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 180 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPP 359
++ E + A L++ W+D L WN E+G N PD+ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 360 GT 365
GT
Sbjct: 85 GT 86
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/62 (27%), Positives = 26/62 (41%)
Frame = +3
Query: 180 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPP 359
++ E + A L++ W+D L WN E+G N PD+ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 360 GT 365
GT
Sbjct: 85 GT 86
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +3
Query: 21 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 185
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 186 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAAXNHPPGT 365
E + L++ W D + WN ++G P + PDV N+A GT
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 366 TP 371
P
Sbjct: 124 YP 125
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 29.5 bits (63), Expect = 0.041
Identities = 21/101 (20%), Positives = 40/101 (39%), Gaps = 7/101 (6%)
Frame = +3
Query: 63 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 221
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 222 LQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPDVGTANAA 344
++ +W D +L W+ E+G P + PD+ N A
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNA 117
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.5 bits (63), Expect = 0.041
Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Frame = +3
Query: 90 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 254
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 255 WNAGEWGCSTWAGCPRNACGXPDVGTANAA 344
WN E+G P PD+ N A
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA 126
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = +3
Query: 90 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 254
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 255 WNAGEWGCSTWAGCPRNACGXPDVGTANAA 344
W E+G P + PD+ N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Frame = +3
Query: 90 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 254
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 255 WNAGEWGCSTWAGCPRNACGXPDVGTANAA 344
W E+G P + PD+ N A
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.1 bits (57), Expect = 0.22
Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +3
Query: 141 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGX 317
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G P +
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 318 PDVGTANAA 344
PD+ N A
Sbjct: 111 PDIVLFNNA 119
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.29
Identities = 18/67 (26%), Positives = 25/67 (37%)
Frame = +3
Query: 144 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWAGCPRNACGXPD 323
+V L+LH ++ E + + W D L WNA E+ P N PD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 324 VGTANAA 344
N A
Sbjct: 92 TILYNNA 98
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLGSRSRSFQ 225
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -3
Query: 318 AXHKRSEDTQPKCCSPIPLRSNSVACRSNSFE 223
A + + + K C + SNS+ RS SF+
Sbjct: 194 AVNIEKSENETKTCKKYAISSNSLRSRSRSFQ 225
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/30 (33%), Positives = 11/30 (36%)
Frame = +1
Query: 502 PXSPSXGXPPXXXTGXPXXXPXXXXPXFXP 591
P +P G PP G P P P P
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.7
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 69 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 236
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 237 IDKRLSW 257
D RL++
Sbjct: 68 TDPRLAF 74
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 86 GQ*CCVFAFCRTSYSTSEEKXVTRII 9
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 6.2
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 69 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 236
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 237 IDKRLSW 257
D RL++
Sbjct: 68 TDPRLAF 74
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,100
Number of Sequences: 438
Number of extensions: 4336
Number of successful extensions: 34
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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