Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_I07
(804 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 74 3e-14
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 44 3e-05
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 1e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.027
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 31 0.14
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 31 0.19
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.25
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 30 0.33
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.33
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.77
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 1.8
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 27 4.1
SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate reductase/... 26 5.5
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 7.2
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 25 9.5
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 73.7 bits (173), Expect = 3e-14
Identities = 38/70 (54%), Positives = 45/70 (64%)
Frame = +3
Query: 432 EQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGA 611
E+G++S WRGN ANV+RYFPTQALNFAFKDK+K++F R GGA
Sbjct: 84 EEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF--GYKKERDGYAKWFAGNLASGGA 141
Query: 612 AGXTSLCFVY 641
AG SL FVY
Sbjct: 142 AGAASLLFVY 151
Score = 60.9 bits (141), Expect = 2e-10
Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Frame = +2
Query: 263 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKGAG 439
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 440 SPFILAW*LRQRHQVLPDPGAQLRLQGQVQAGVPRAGVDKKTQFWRYFAGNLASG 604
I W + + P L + + ++ + ++FAGNLASG
Sbjct: 87 --VISLWRGNTANVLRYFPTQALNFAFKDKFKKMFGYKKERDGYAKWFAGNLASG 139
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 44.0 bits (99), Expect = 3e-05
Identities = 35/114 (30%), Positives = 56/114 (49%)
Frame = +2
Query: 269 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAGSPF 448
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I G
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHIYHVYGLHG 77
Query: 449 ILAW*LRQRHQVLPDPGAQLRLQGQVQAGVPRAGVDKKTQFWRYFAGNLASGWC 610
+ ++V P G + QV+ + R + +T R+ +G+LA G C
Sbjct: 78 LYQGHTATLYRVFPYAGIKFVAYEQVRRVLIR-DPEHETHARRFLSGSLA-GTC 129
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 1e-04
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +2
Query: 278 LAGGISAAVSKTAVAPIERVKLLLQVQH 361
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 36.3 bits (80), Expect = 0.005
Identities = 24/70 (34%), Positives = 32/70 (45%)
Frame = +3
Query: 435 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAA 614
+GL+ F+RGN N +R FP A+ FA + KQ R L R + + G A
Sbjct: 70 EGLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQ----RALKNRSHQNLENHERLLFGAIA 125
Query: 615 GXTSLCFVYP 644
G S YP
Sbjct: 126 GAASCATTYP 135
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.027
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +2
Query: 251 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 349
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 3.1
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +2
Query: 275 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 370
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 31.5 bits (68), Expect = 0.14
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +2
Query: 278 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAGSP 445
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIP 263
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 31.1 bits (67), Expect = 0.19
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +2
Query: 275 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKGAG 439
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + G
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEG 82
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 30.7 bits (66), Expect = 0.25
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 254 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ 358
PV + +++G IS + V P+E V++ LQ+Q
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ 143
Score = 28.7 bits (61), Expect = 1.0
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGA 436
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 437 G 439
G
Sbjct: 70 G 70
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 30.3 bits (65), Expect = 0.33
Identities = 21/70 (30%), Positives = 33/70 (47%)
Frame = +3
Query: 435 QGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGRVLTRRRSSGVTSLVIWPPGGAA 614
+G +RG ++ P +AL FA D Y +++ +V R+ SS S++ G A
Sbjct: 59 EGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW-RKVFKRKDSSPALSIL---TGSCA 114
Query: 615 GXTSLCFVYP 644
G T V P
Sbjct: 115 GFTETFVVVP 124
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.33
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +2
Query: 212 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 352
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.77
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 278 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 367
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 269 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 358
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 26.6 bits (56), Expect = 4.1
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Frame = +1
Query: 76 HTPYPSXCSR*LRN---YSKSPXFKNQELVFRD--PPSACAATPTSTYSPSED 219
H PYP + N Y +S V+R+ PPSA + P+S+ SPS D
Sbjct: 339 HFPYPQPSNLDAINAKTYFQSSSNSPAPYVYRNNLPPSATSFQPSSSRSPSVD 391
>SPAC4G9.09c |arg11||N-acetyl-gamma-glutamyl-phosphate
reductase/acetylglutamate kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 885
Score = 26.2 bits (55), Expect = 5.5
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 395 KGIVDAFVR-IPKGAGSPFILAW*LRQRHQVLPDPGAQLRLQGQVQAGVP 541
+G VDA+V +P G P++ A V+ D A R + Q G+P
Sbjct: 635 EGAVDAWVMALPNGVCKPYVDALTSANGKSVIVDLSADYRFEPSWQYGLP 684
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 417 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 310
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 9.5
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2
Query: 425 PKGAGSPFILAW*LRQRHQVLPDP-GAQLRLQGQVQAGVPRAGV 553
P+GA S F L W Q+ + +P+ QL +V AG+ +G+
Sbjct: 320 PRGANSSFSLTW---QQMKAIPNSLVPQLSWNAEVTAGLMYSGI 360
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,703,713
Number of Sequences: 5004
Number of extensions: 49944
Number of successful extensions: 166
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 164
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 390427050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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