Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_H15
(823 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 3e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.001
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 31 0.013
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 31 0.013
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.017
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 30 0.030
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.030
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 30 0.030
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.030
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.039
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.052
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.052
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 29 0.052
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 29 0.069
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 29 0.069
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.12
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.4
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 3e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 244
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKRLSWNA 280
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKRLSWNAG 283
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 422
V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 27.1 bits (57), Expect = 0.21
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFR 546
P D QTC KFGS ++ ++D R
Sbjct: 161 PFDEQTCVLKFGSWTYDGFKVDLR 184
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 288 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 196
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 422
V S+ +WRPD+VL NA A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFR 546
P D QTC KFGS ++ ++D R
Sbjct: 157 PFDEQTCVMKFGSWTYDGFQVDLR 180
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
+ RLW+PDV++ N+A G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFR 546
P D Q C KFGS ++ ++D +
Sbjct: 156 PFDDQRCEMKFGSWTYDGFQLDLQ 179
Score = 22.2 bits (45), Expect = 6.0
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 59 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 223
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 224 RIQADLQMNWIDKRLSWNAGGVG 292
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.017
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 265
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 266 LSWNAGGVGLQHL 304
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.9 bits (64), Expect = 0.030
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNW 473
ER+WRPD N + + R+S +G + + RL I M+L N+
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNF 169
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 187 PFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 29.9 bits (64), Expect = 0.030
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 187 PFDDQHCDMKFGSWTYDGNQVD 208
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.030
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 422
G V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 26.6 bits (56), Expect = 0.28
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFR 546
P D Q+C KFGS +N ++D +
Sbjct: 166 PFDEQSCIMKFGSWTYNGAQVDLK 189
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.039
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVD 140
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 29.1 bits (62), Expect = 0.052
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Frame = +3
Query: 318 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWI 425
+++W+PD+VL N A G+Y +R + + NG V W+
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWV 142
Score = 28.3 bits (60), Expect = 0.091
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 466 TIGPNDMQTCTFKFGSRMHNSDEM 537
T P D QTC KFGS N D++
Sbjct: 156 TYFPFDQQTCIMKFGSWTFNGDQV 179
Score = 25.8 bits (54), Expect = 0.48
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 304
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.052
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
Frame = +3
Query: 291 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 422
G T V SE +W PD+VL N A G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVW 135
Score = 25.4 bits (53), Expect = 0.64
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFR 546
P D QTC KFGS ++ +D R
Sbjct: 153 PFDEQTCFMKFGSWTYDGYTVDLR 176
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 29.1 bits (62), Expect = 0.052
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +3
Query: 285 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSW 422
E+G T L V SE +W PD+VL N A G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFRD*QXNI 564
P D QTC KFGS ++ ++D + N+
Sbjct: 153 PFDQQTCFMKFGSWTYDGIQIDLKHINQNM 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 28.7 bits (61), Expect = 0.069
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 422
V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 26.2 bits (55), Expect = 0.37
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMDFR 546
P D+QTC K GS ++ ++D R
Sbjct: 161 PYDVQTCVLKLGSWTYDGFKVDLR 184
Score = 22.2 bits (45), Expect = 6.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 288 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 196
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.069
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWI 425
V R+WRPD +L N A + VS+ G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.12
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 436 TLALQFLCS*TIGPNDMQTCTFKFGSRMHNSDEMDFR 546
TL L + I P+D Q C + S H +DEM F+
Sbjct: 158 TLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQ 194
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.12
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 107 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 265
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 266 LSWNAGGVGLQHL 304
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/40 (27%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +3
Query: 309 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 425
++ +LW+PD+++ N+A G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 25.4 bits (53), Expect = 0.64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 197 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 292
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.6
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 475 PNDMQTCTFKFGSRMHNSDEMD 540
P D Q C KFGS ++ +++D
Sbjct: 119 PFDDQHCDMKFGSWTYDGNQVD 140
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 103 GQ*CCVFAFCRTSYSTSEEKXVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.5
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 158 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 325
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 326 V 328
+
Sbjct: 299 I 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,796
Number of Sequences: 438
Number of extensions: 4967
Number of successful extensions: 69
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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