Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_H06
(816 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0413 + 22681957-22682035,22682253-22682788 32 0.63
02_05_0543 + 29872168-29872767,29873089-29873115 30 1.9
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.5
03_05_1019 + 29736644-29736709,29737156-29737515,29737595-297377... 30 2.5
10_08_0553 - 18720436-18720494,18721102-18721106,18721136-187212... 29 3.3
11_01_0515 + 4003167-4003229,4003318-4003738,4004224-4004367,400... 29 4.4
08_02_1625 + 28336168-28336409,28336491-28336564,28337162-283372... 29 4.4
06_03_1208 - 28422941-28423139,28423854-28424434,28424705-284250... 29 4.4
03_02_0764 + 10990220-10992410,10992809-10993616,10994734-109949... 29 4.4
09_03_0043 + 11851889-11852790,11853388-11853877 29 5.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 5.8
05_05_0175 + 22966151-22967614 29 5.8
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 29 5.8
12_02_0263 - 16551831-16551909,16552668-16553173 28 7.7
09_04_0535 + 18397051-18397644 28 7.7
04_04_0137 - 23053148-23053798,23053911-23054146,23054268-230544... 28 7.7
>02_04_0413 + 22681957-22682035,22682253-22682788
Length = 204
Score = 31.9 bits (69), Expect = 0.63
Identities = 22/68 (32%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = -1
Query: 438 CCGQ-LSHSCCPCEKTCKR*LLICLCI--AAAGSSPLSCC*GAICPGPNPCAGGLGPGTP 268
CCG S C C + C+ S+ CC G C G C GG P +P
Sbjct: 77 CCGAGCSEQCAECPRPPHPPPSPSPCVHPPCCESAAGCCCNG--CSGGG-CGGGQCPPSP 133
Query: 267 GCSPHGPP 244
C H PP
Sbjct: 134 SCENHHPP 141
>02_05_0543 + 29872168-29872767,29873089-29873115
Length = 208
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 227 SLYELMGGPWGEQPGVPGPKPP 292
SL +++ G WGE P P P PP
Sbjct: 166 SLDQVLEGIWGESPAAPPPPPP 187
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 2.5
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Frame = +2
Query: 245 GGPWGEQPGVPG---PKPPAQGLGPGQMAPQQQLNGDDPAAAMHR 370
GGP PG G +PPA G G G AP++ L G A+ R
Sbjct: 115 GGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALAR 159
>03_05_1019 +
29736644-29736709,29737156-29737515,29737595-29737735,
29737912-29738044,29738344-29738457,29738553-29738701,
29740815-29740907,29741019-29741079,29741180-29741512,
29742149-29742224,29742322-29742421,29743300-29743369,
29743987-29744082,29744355-29744402,29744427-29744658,
29745186-29745246,29745265-29745375
Length = 747
Score = 29.9 bits (64), Expect = 2.5
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = -1
Query: 402 EKTCKR*LLICLCIAAAGSSPLSCC*--GAICPGPNPCAGGLGPGTPGCSPHGPP 244
+K K+ + I L A G SP C G I P + PGTP C PHG P
Sbjct: 110 QKNVKKPIRIYLNYDAVGHSPDRDCKTVGDIVKLGEPPVPSI-PGTPVCDPHGDP 163
>10_08_0553 -
18720436-18720494,18721102-18721106,18721136-18721257,
18721390-18721478,18722136-18722316,18722403-18722654,
18722755-18722993,18723680-18723914,18724072-18724132,
18724632-18724987
Length = 532
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = +2
Query: 245 GGPWGEQPGVPGPKPPAQGLGPGQMAPQQQLNGDDPAAAMHRQINNHLLQVFSQGQQEWL 424
GG +G G G G GP QQ + H+Q H + S QQ+WL
Sbjct: 32 GGGFGGGGGGGGGNHGYYGRGPQPQPQQQHYHHQAQQLHQHQQQQQHAQRNSSSQQQQWL 91
>11_01_0515 +
4003167-4003229,4003318-4003738,4004224-4004367,
4004474-4004556,4004661-4004775,4005309-4005400,
4005558-4005612,4005689-4005834,4005888-4006001,
4006149-4006342,4006985-4007112,4008526-4008583,
4009800-4009876,4010214-4010263,4010336-4010515,
4010633-4010731,4010816-4011133,4011221-4011281,
4011693-4012781,4012951-4013005,4013133-4013291,
4013923-4014442
Length = 1406
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 320 PFAQAPILAPGAWGPELPAAHPMDLPLIHTG 228
P A APIL GA GP +P + P P+ +G
Sbjct: 90 PPAAAPILPSGARGPPVPGSPPAAAPVPPSG 120
>08_02_1625 +
28336168-28336409,28336491-28336564,28337162-28337236,
28337433-28337459,28339261-28339634,28339746-28340492
Length = 512
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 312 GKWPLSSSSMEMILQLLCTDRSIIIFYKSFH 404
G+ P + + L LC DRS+ +F+ +FH
Sbjct: 441 GQGPYNGVGLCTALSTLCPDRSLYVFWDNFH 471
>06_03_1208 -
28422941-28423139,28423854-28424434,28424705-28425078,
28425235-28425339,28425902-28425970,28426084-28426156,
28426395-28426478,28426616-28426648,28426731-28426790,
28427535-28427627,28427851-28427970,28428804-28428886,
28428887-28429007,28429114-28429164,28429245-28429333,
28429429-28429561,28430220-28430354,28430581-28430952,
28431679-28431796,28431883-28431998,28432131-28432442
Length = 1106
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 269 GVPGPKPPAQGLGPGQMAPQQQLNGDDPAAAMHR 370
G G PPA PGQ P+ GDDPA+ +R
Sbjct: 7 GGRGAPPPATAASPGQKRPR----GDDPASPSNR 36
>03_02_0764 +
10990220-10992410,10992809-10993616,10994734-10994968,
10995028-10995169,10997365-10997444,10997636-10997776
Length = 1198
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = -1
Query: 753 HEDDCPMMAVAHQCRQLLVYI-VNYPTSKHPCSSHITICHNHIPNVCDVHAA--XELNSS 583
HED+ + + L YI ++YP + P +S N + + D HAA +
Sbjct: 286 HEDEHGEVVAESRRNNLEPYIGLHYPATDIPQASRFLFRQNRVRMIADCHAAPVRVIQDP 345
Query: 582 ALSNVVDLGDSYLALIGACH 523
AL+ + L S L CH
Sbjct: 346 ALTQPLCLVGSTLRSPHGCH 365
>09_03_0043 + 11851889-11852790,11853388-11853877
Length = 463
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/57 (24%), Positives = 23/57 (40%)
Frame = +2
Query: 95 SKQSHGRXXXXXXXEDDQGPFSGXPLTPRLMDSQTLTCLTSKRTSLYELMGGPWGEQ 265
++++HG +DD GP++G P D+ + S GG W Q
Sbjct: 239 TQRAHGSKLNNHENKDDYGPYTGKESPPVQYDTMLCSYSISSTNETNSSDGGGWQHQ 295
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 312 PGPNPCAGGLGPGTPGCSPHGPP 244
P P P GG P P +P+GPP
Sbjct: 9 PHPPPPQGGFPPQPPPMNPYGPP 31
>05_05_0175 + 22966151-22967614
Length = 487
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Frame = -1
Query: 336 SCC*GAICPG-PNPCAGGLGPGTPGCSPHGPPINSYR 229
SCC + G P A G G+PG P PP++ R
Sbjct: 78 SCCGSSSAAGTPRSAARCGGGGSPGAPPSSPPLSPQR 114
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 640 TNSNMTGAGMLGSGIINNVNKQLPTLMGNSHHGT 741
TN+N T G+ + VN PT +GN+ H +
Sbjct: 408 TNANATNDAEQGASVPRTVNTPHPTRLGNASHAS 441
>12_02_0263 - 16551831-16551909,16552668-16553173
Length = 194
Score = 28.3 bits (60), Expect = 7.7
Identities = 19/63 (30%), Positives = 27/63 (42%)
Frame = +2
Query: 146 QGPFSGXPLTPRLMDSQTLTCLTSKRTSLYELMGGPWGEQPGVPGPKPPAQGLGPGQMAP 325
Q G TP+ + Q ++ S + +G +QP P P+PP P Q P
Sbjct: 43 QSQSQGHAPTPQQLSQQAMSRFPSNIDAHLRPLGPIRFQQPPQPQPQPPQP---PPQPQP 99
Query: 326 QQQ 334
QQQ
Sbjct: 100 QQQ 102
>09_04_0535 + 18397051-18397644
Length = 197
Score = 28.3 bits (60), Expect = 7.7
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +2
Query: 239 LMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQLNGDDPAAAMHRQ 373
+MG P G PG P PPA G A QQL PAAA +Q
Sbjct: 12 VMGAPVGFPPGAYPPPPPA---GAAAAAYAQQLYA-PPAAAAAQQ 52
>04_04_0137 -
23053148-23053798,23053911-23054146,23054268-23054458,
23054587-23056010
Length = 833
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 266 PGVPGPKPPAQGLGPGQMAPQQQLNG 343
P VP P PP P +AP+QQ +G
Sbjct: 392 PAVPPPPPPTPPPPPPLLAPKQQSSG 417
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,706,290
Number of Sequences: 37544
Number of extensions: 566022
Number of successful extensions: 1976
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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