Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_H01
         (783 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0047 - 429838-429960,430413-430508,430589-430596,431088-43...    32   0.59 
01_02_0019 + 10262685-10262909,10263014-10263076,10263155-102633...    32   0.59 
02_02_0613 - 12145489-12145590,12145698-12145761,12146180-12146721     28   7.3  
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257...    28   9.6  
03_01_0209 - 1647146-1647238,1647574-1647614,1647651-1647718,164...    28   9.6  

>06_01_0047 -
           429838-429960,430413-430508,430589-430596,431088-431141,
           431226-431274,431368-431466,431560-431639,431926-431989,
           432082-432255,432342-432965,433046-433189,433262-433372,
           433442-433498,433664-433798
          Length = 605

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -2

Query: 407 PALGPVVKNSLIF*YWTKLSASKHFFDDNIKTGRSASFSLERCSCVCRRHYRVLSMLTPL 228
           P +  +  N L+     KLS SK   DDNIK  RS S  L+    +  +  R +  +  +
Sbjct: 71  PHVNEISTNELLKTLKRKLSKSKRSEDDNIKMKRSESIELDN-DVMINQVLRDIIQMDQI 129

Query: 227 PEHIRPELHLH 195
             +++ +L++H
Sbjct: 130 INNLKKKLNIH 140


>01_02_0019 +
           10262685-10262909,10263014-10263076,10263155-10263316,
           10263407-10263589,10263676-10263806,10264251-10264419,
           10264524-10264653,10265702-10265898
          Length = 419

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
 Frame = +3

Query: 156 RFRLKTTNPESWDM-KMKFWSDMLRQWCKHRKDPIVSSADARAA----FQRKGR-TPACL 317
           RF+  T     W   K+ FW  +L +  +  +   + SA AR      F R G  TP CL
Sbjct: 36  RFKAFTGQRRDWPQPKLLFWKGLLLRVARRLR---LCSAPARLVLGVWFARPGGLTPLCL 92

Query: 318 DIVIEEMFRSGEL 356
             V+EEM   GE+
Sbjct: 93  PQVLEEMRADGEI 105


>02_02_0613 - 12145489-12145590,12145698-12145761,12146180-12146721
          Length = 235

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = -3

Query: 235 HHCLSISDQNFIFMSQDSGLVVFKRXRGEECVHLDIVVP-TLRELVLGYSS 86
           H C  + +  F F+S D+ L   K   G E  HL +  P  L+EL+  + S
Sbjct: 119 HSCHGLKEACFKFLSSDANLERMKASEGYE--HLKVSCPFVLKELIARFIS 167


>08_02_1277 + 25823835-25825113,25825201-25825418,25825501-25825724,
            25826468-25827080,25827735-25827775,25830549-25831191,
            25832595-25834012,25834110-25834251,25834415-25834522,
            25835346-25835558,25835643-25835753,25836099-25836293,
            25836555-25836695,25836835-25836909
          Length = 1806

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +1

Query: 340  FEAESFVQYQNINEFFTTGPRAGYVG 417
            F+  S + Y  IN++ T GPR   VG
Sbjct: 1315 FQHPSLLSYAGINQYNTMGPRVSVVG 1340


>03_01_0209 -
           1647146-1647238,1647574-1647614,1647651-1647718,
           1647762-1647779,1647886-1648361,1648626-1648994,
           1649044-1649092,1650362-1650405,1650901-1651116
          Length = 457

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 14/29 (48%), Positives = 18/29 (62%), Gaps = 4/29 (13%)
 Frame = +3

Query: 201 MKFWS---DMLRQWCKHRK-DPIVSSADA 275
           +K WS   +MLR WC +RK  P  + ADA
Sbjct: 426 VKTWSRMTEMLRVWCNNRKVSPTAADADA 454


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,482,008
Number of Sequences: 37544
Number of extensions: 337543
Number of successful extensions: 878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)