Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_H01
         (783 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC042050-1|AAH42050.1|  453|Homo sapiens CHMP family, member 7 p...    49   2e-05
BC019110-1|AAH19110.1|  453|Homo sapiens CHMP family, member 7 p...    49   2e-05
BC004344-1|AAH04344.1|  411|Homo sapiens CHMP7 protein protein.        48   5e-05
AJ539163-1|CAD62248.1|  959|Homo sapiens xylosyltransferase I pr...    31   6.2  
AJ277441-1|CAC16787.1|  827|Homo sapiens xylosyltransferase I pr...    31   6.2  

>BC042050-1|AAH42050.1|  453|Homo sapiens CHMP family, member 7
           protein.
          Length = 453

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 25/85 (29%), Positives = 41/85 (48%)
 Frame = +3

Query: 162 RLKTTNPESWDMKMKFWSDMLRQWCKHRKDPIVSSADARAAFQRKGRTPACLDIVIEEMF 341
           R +  N   WD KM FW+ ++    + +    +   D + AFQRKG  P  L  V++++ 
Sbjct: 40  RSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLL 99

Query: 342 RSGELCPISKYQRILHNGTEGWVRW 416
           R GEL   S +   + +    W+ W
Sbjct: 100 RRGELQRESDFMASVDS---SWISW 121


>BC019110-1|AAH19110.1|  453|Homo sapiens CHMP family, member 7
           protein.
          Length = 453

 Score = 49.2 bits (112), Expect = 2e-05
 Identities = 25/85 (29%), Positives = 41/85 (48%)
 Frame = +3

Query: 162 RLKTTNPESWDMKMKFWSDMLRQWCKHRKDPIVSSADARAAFQRKGRTPACLDIVIEEMF 341
           R +  N   WD KM FW+ ++    + +    +   D + AFQRKG  P  L  V++++ 
Sbjct: 40  RSREVNSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLL 99

Query: 342 RSGELCPISKYQRILHNGTEGWVRW 416
           R GEL   S +   + +    W+ W
Sbjct: 100 RRGELQRESDFMASVDS---SWISW 121


>BC004344-1|AAH04344.1|  411|Homo sapiens CHMP7 protein protein.
          Length = 411

 Score = 47.6 bits (108), Expect = 5e-05
 Identities = 24/80 (30%), Positives = 39/80 (48%)
 Frame = +3

Query: 177 NPESWDMKMKFWSDMLRQWCKHRKDPIVSSADARAAFQRKGRTPACLDIVIEEMFRSGEL 356
           N   WD KM FW+ ++    + +    +   D + AFQRKG  P  L  V++++ R GEL
Sbjct: 3   NSTDWDSKMGFWAPLVLSHSRRQGVVRLRLRDLQEAFQRKGSVPLGLATVLQDLLRRGEL 62

Query: 357 CPISKYQRILHNGTEGWVRW 416
              S +   + +    W+ W
Sbjct: 63  QRESDFMASVDS---SWISW 79


>AJ539163-1|CAD62248.1|  959|Homo sapiens xylosyltransferase I
           protein.
          Length = 959

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 35  ETVNIFRHHCPMMGLPDR-GIPEDKLPQCWYDDVQMNALFAPXSFKNHQP 181
           E+   F H+ P + LP R G+   K+   W    +   L AP +F N QP
Sbjct: 800 ESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVAPLTFSNRQP 849


>AJ277441-1|CAC16787.1|  827|Homo sapiens xylosyltransferase I
           protein.
          Length = 827

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = +2

Query: 35  ETVNIFRHHCPMMGLPDR-GIPEDKLPQCWYDDVQMNALFAPXSFKNHQP 181
           E+   F H+ P + LP R G+   K+   W    +   L AP +F N QP
Sbjct: 668 ESTAEFTHYKPPLNLPLRPGVWTVKILHHWVPVAETKFLVAPLTFSNRQP 717


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,804,433
Number of Sequences: 237096
Number of extensions: 1892348
Number of successful extensions: 3850
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3850
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)