Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_G19
         (809 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;...    59   1e-07
UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein P0459B...    48   3e-04
UniRef50_Q7RAM2 Cluster: Putative uncharacterized protein PY0647...    42   0.018
UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ...    38   0.30 

>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 508

 Score = 58.8 bits (136), Expect = 1e-07
 Identities = 35/81 (43%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
 Frame = +3

Query: 99  LVDPASSYMLVSKIK-PCMSQCKPY*GDTANGSIYQFWFLRSYSVTW-DNCGNSRANTCN 272
           LVDPASS  L  ++   C+S    Y  +TANGS+ Q WFL S    + DNCGNSRANTC 
Sbjct: 423 LVDPASSICLSQRLSHACLSTHGRY-SETANGSLNQLWFLWSLPSRYLDNCGNSRANTCR 481

Query: 273 QNSDQ*WG*VLLLNQNPSTXG 335
           +        +     NP + G
Sbjct: 482 RAPTSGDACIYQTKTNPGSPG 502


>UniRef50_Q6Z8F1 Cluster: Putative uncharacterized protein
           P0459B01.16; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0459B01.16 - Oryza sativa subsp. japonica (Rice)
          Length = 172

 Score = 48.0 bits (109), Expect = 3e-04
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +1

Query: 91  RAPWLILPVVICLSQRLSHACLS 159
           RA WLILPVVICLSQRLSHAC S
Sbjct: 148 RATWLILPVVICLSQRLSHACAS 170


>UniRef50_Q7RAM2 Cluster: Putative uncharacterized protein PY06477;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06477 - Plasmodium yoelii
           yoelii
          Length = 58

 Score = 41.9 bits (94), Expect = 0.018
 Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
 Frame = +1

Query: 40  FLRPMRCDVLVFE-LTKKRAPWLILPVVICLSQRLSHA 150
           +++ ++ ++L+F  L      WLILPVVICLSQRLSHA
Sbjct: 2   YIKIIKYNILIFHILLILIVTWLILPVVICLSQRLSHA 39


>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
           scapularis|Rep: Putative secreted protein - Ixodes
           scapularis (Black-legged tick) (Deer tick)
          Length = 65

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 15/24 (62%), Positives = 18/24 (75%)
 Frame = +3

Query: 165 PY*GDTANGSIYQFWFLRSYSVTW 236
           P  G+TANGS+ Q WFLRS+  TW
Sbjct: 2   PKQGETANGSLNQLWFLRSFLPTW 25


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,503,461
Number of Sequences: 1657284
Number of extensions: 6529679
Number of successful extensions: 11133
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11130
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69966202150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)