Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_G01
         (780 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16660-1|CAA34646.1|  223|Homo sapiens p25 protein protein.            32   2.0  
AK128423-1|BAC87434.1|  135|Homo sapiens protein ( Homo sapiens ...    32   2.7  
AK096678-1|BAC04838.1|  738|Homo sapiens protein ( Homo sapiens ...    31   6.1  
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.     31   6.1  
BX640618-1|CAE45772.1|  120|Homo sapiens hypothetical protein pr...    30   8.1  
AF103029-1|AAD16470.1|  116|Homo sapiens immunoglobulin heavy ch...    30   8.1  

>X16660-1|CAA34646.1|  223|Homo sapiens p25 protein protein.
          Length = 223

 Score = 32.3 bits (70), Expect = 2.0
 Identities = 21/53 (39%), Positives = 28/53 (52%)
 Frame = -1

Query: 456 PIGGMRPLRVQSRWERTAXPALRPGHRRGPEPRSIGCPSRPRVDKSGQADLRA 298
           P G   P R Q++    + P LRP HR   +PRS G P+ PR  +  + D RA
Sbjct: 18  PSGPRPPSRSQAQTPPRSVPRLRPRHRHPQDPRSPG-PA-PRHRRPPRPDPRA 68


>AK128423-1|BAC87434.1|  135|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46566 fis, clone THYMU3040829, moderately
           similar to Cold-inducible RNA-binding protein. ).
          Length = 135

 Score = 31.9 bits (69), Expect = 2.7
 Identities = 17/31 (54%), Positives = 18/31 (58%)
 Frame = -1

Query: 459 PPIGGMRPLRVQSRWERTAXPALRPGHRRGP 367
           PP    RPL    RW  TA P+ RPG RRGP
Sbjct: 87  PPANPSRPLSPVCRW--TADPS-RPGRRRGP 114


>AK096678-1|BAC04838.1|  738|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39359 fis, clone PEBLM2004290. ).
          Length = 738

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = +3

Query: 15  KGVTCVTPAVLASAVHILKLERYRED*HGPCARMTRKIVKRSTFFRCPRIKRELNELEA- 191
           KG T   PA++   +    L+   E    P  R+T ++ K+    RCP  K + +E+ + 
Sbjct: 505 KGRTAYNPALIWKEIKSF-LKGSFEALSCPHGRLTEEVYKKLGRKRCPNFKEDRSEIYSL 563

Query: 192 -EMAAKISSYRGYAWEERI 245
             +  +I S +GY  EE +
Sbjct: 564 FSLYQQIRSQKGYFDEEDV 582


>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
          Length = 2467

 Score = 30.7 bits (66), Expect = 6.1
 Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = +3

Query: 15   KGVTCVTPAVLASAVHILKLERYRED*HGPCARMTRKIVKRSTFFRCPRIKRELNELEA- 191
            KG T   PA++   +    L+   E    P  R+T ++ K+    RCP  K + +E+ + 
Sbjct: 834  KGRTAYNPALIWKEIKSF-LKGSFEALSCPHGRLTEEVYKKLGRKRCPNFKEDRSEIYSL 892

Query: 192  -EMAAKISSYRGYAWEERI 245
              +  +I S +GY  EE +
Sbjct: 893  FSLYQQIRSQKGYFDEEDV 911


>BX640618-1|CAE45772.1|  120|Homo sapiens hypothetical protein
           protein.
          Length = 120

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -1

Query: 489 GRRVGLXRSLPPIGGMRPLRV-QSRWERTAXPALRPGHRRGPEPRSIGCP 343
           GR  G+ R  P + G   L   + R  R       PGHR  PEP S+  P
Sbjct: 25  GRLSGVDRRCPQLTGSMTLEEWKLRQSRDVRVNCSPGHRWRPEPSSLRAP 74


>AF103029-1|AAD16470.1|  116|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 116

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 16/49 (32%), Positives = 19/49 (38%)
 Frame = +3

Query: 276 SLHRLCRQLSNRPAPTCPLVDERGNRCFSAQARAGVLAVMLXRQFAPND 422
           S H L R +     P   + D RG+ C     R G L   L R   P D
Sbjct: 59  STHHLSRHVQEPVLPDTEVCDRRGHGCLLLCERRGWLHARLFRPLGPGD 107


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,118,660
Number of Sequences: 237096
Number of extensions: 2314597
Number of successful extensions: 6162
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6162
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9478778060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)