Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_F22
         (1278 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0382 - 22501041-22501279,22501717-22501810                       31   2.6  
01_03_0005 + 11568545-11569119,11569179-11569191                       29   5.9  
07_01_0080 + 587674-588510                                             29   7.9  
04_03_0977 + 21381857-21383757,21384299-21384458,21384669-213847...    29   7.9  

>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 30.7 bits (66), Expect = 2.6
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +3

Query: 501 GGGGXFXXPPPPPP 542
           GGGG +  PPPPPP
Sbjct: 90  GGGGGYGKPPPPPP 103


>01_03_0005 + 11568545-11569119,11569179-11569191
          Length = 195

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +3

Query: 477 GGFFXXXXGGGGXFXXPPPPPP 542
           GG +    GGGG +  PPPP P
Sbjct: 124 GGGWQQGGGGGGAYPTPPPPNP 145


>07_01_0080 + 587674-588510
          Length = 278

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 501 GGGGXFXXPPPPPP 542
           GG G F  PPPPPP
Sbjct: 83  GGDGMFRRPPPPPP 96


>04_03_0977 +
           21381857-21383757,21384299-21384458,21384669-21384717,
           21385117-21385169
          Length = 720

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +3

Query: 501 GGGGXFXXPPPPPP 542
           GGGG    PPPPPP
Sbjct: 93  GGGGWVQLPPPPPP 106


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,761,224
Number of Sequences: 37544
Number of extensions: 446551
Number of successful extensions: 6580
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5661
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)