Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F21
(713 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0600 - 5262573-5262773,5262850-5262952,5263050-5263180,526... 32 0.52
11_01_0385 + 2915532-2916482 30 1.6
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 1.6
01_07_0082 - 40965947-40967023 30 2.1
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 29 2.8
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.7
02_04_0400 - 22608519-22608844,22609044-22609122 29 3.7
07_03_1136 + 24218601-24218734,24218769-24219906 29 4.8
03_02_0765 + 11000724-11002496 29 4.8
01_06_1737 - 39559321-39559461,39559761-39559817,39559919-395601... 29 4.8
01_06_0175 + 27229878-27230056,27231102-27231159,27231230-272312... 28 6.4
06_01_0194 + 1503350-1503554,1504399-1504490,1504835-1504935,150... 28 8.5
05_06_0282 + 26915249-26915881 28 8.5
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 23 9.8
>08_01_0600 -
5262573-5262773,5262850-5262952,5263050-5263180,
5263263-5263312,5265266-5265725,5266349-5266708
Length = 434
Score = 31.9 bits (69), Expect = 0.52
Identities = 19/67 (28%), Positives = 21/67 (31%)
Frame = +3
Query: 300 GGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXLP 479
GGG PP G P + G PP P PP Q G PP
Sbjct: 15 GGGAPPQWGAIPPPVPHQQQ-QYAPPPPQMWGQAPPPPPQMWGQAPPPPQPAYGQPPPAQ 73
Query: 480 SXXXGXP 500
+ G P
Sbjct: 74 AGYYGAP 80
>11_01_0385 + 2915532-2916482
Length = 316
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/34 (44%), Positives = 15/34 (44%), Gaps = 3/34 (8%)
Frame = +3
Query: 387 PXGGXXPPXPFFXXHPPP---XXQXGXGXPPXLP 479
P G PP P F HPPP Q G PP P
Sbjct: 217 PGGNKWPPLPPFPSHPPPTPAWPQPGNKWPPLPP 250
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +3
Query: 300 GGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXLP 479
GG PP P+ G G G P PP F PPP G PP P
Sbjct: 1131 GGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPA-PPPPAGFRGGTPPPNAHGGVAPPPPPP 1189
Query: 480 SXXXG 494
G
Sbjct: 1190 RGHGG 1194
Score = 29.5 bits (63), Expect = 2.8
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Frame = -2
Query: 478 GRXGGXPXPXXXXG--GGCXXKKGXGGXXPPX-------GVPXPXXXXKXXXPXXVLGXX 326
G GG P P G GG GG PP GV P P G
Sbjct: 1155 GGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVP 1214
Query: 325 PXGGGPPPPG 296
GG PPPPG
Sbjct: 1215 --GGPPPPPG 1222
Score = 28.3 bits (60), Expect = 6.4
Identities = 31/128 (24%), Positives = 32/128 (25%), Gaps = 4/128 (3%)
Frame = +3
Query: 303 GGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXP-FFXXHPPPXXQXGXGXP--PX 473
G G PP P G G G PP P PPP G G P P
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPP 1164
Query: 474 LPSXXXGXPAXXXXXXXXXXXXXXXXXXXGPXGXXXXXXXXLSXXPP-XGGXXPXPPGXX 650
P+ G G G PP G P PPG
Sbjct: 1165 PPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGR 1224
Query: 651 XXXXPXXG 674
P G
Sbjct: 1225 GLPAPPGG 1232
>01_07_0082 - 40965947-40967023
Length = 358
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/71 (28%), Positives = 23/71 (32%), Gaps = 5/71 (7%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXG---GXXPPXPFFXXHP--PPXXQXGXG 461
P G PP G G + G G PP + +P PP Q G G
Sbjct: 217 PPAGYPPATGSSKPAKAGEPVTAYPAAAGPSTAAPYGTAPPPQYGYGYPAQPPPPQAGYG 276
Query: 462 XPPXLPSXXXG 494
PP P G
Sbjct: 277 YPPPPPQAGYG 287
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -1
Query: 713 GGXXGARXXXAGXAXARXGGGXXAGGXGXXPPXRG 609
GG G R G R GGG GG G RG
Sbjct: 5 GGGGGGRRGGRGGGGGREGGGGGGGGGGRGGQGRG 39
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = +2
Query: 281 PXXXXPRGGGXPXXXGXPQNXXGXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPP 442
P P+GG P P N G P G P PP L PPPP
Sbjct: 9 PHPPPPQGGFPPQPP--PMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPP 60
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 386 PXGGXXP-PXPLFXXTPPPPLXXGXGXXPXP 475
P GG P P P+ PPPP G P P
Sbjct: 14 PQGGFPPQPPPMNPYGPPPPQQPAYGHMPPP 44
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 713 GGXXGARXXXAGXAXARXGGGXXAGGXGXXPPXRG 609
GG G G GGG GG G PP G
Sbjct: 65 GGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNG 99
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +3
Query: 381 GTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXLPSXXXG 494
G P GG P P P G G PP LP G
Sbjct: 89 GLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGG 126
>03_02_0765 + 11000724-11002496
Length = 590
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 713 GGXXGARXXXAGXAXARXGGGXXAGGXG 630
GG GA G A A GGG AGG G
Sbjct: 541 GGGFGAGGGAGGGAGAGFGGGAGAGGGG 568
>01_06_1737 -
39559321-39559461,39559761-39559817,39559919-39560117,
39560217-39560344,39560443-39560548,39560721-39560800,
39561189-39561286,39561368-39561481,39561567-39561707,
39561801-39561885,39562761-39563099
Length = 495
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/57 (29%), Positives = 19/57 (33%)
Frame = +3
Query: 300 GGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPP 470
GGGG G P + G P GG P P + PPP PP
Sbjct: 32 GGGGGGGGGGYPYGQDAHGGGYY--GAPAPQGGYAAPYPAYQQPPPPMPSPAATQPP 86
>01_06_0175 +
27229878-27230056,27231102-27231159,27231230-27231274,
27232711-27232791,27232884-27232922
Length = 133
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +1
Query: 601 RVXPRXGGXXPXPPAXXPPPXRAXAXPAXXXRAPXXP 711
R+ P P PP PPP R P R P P
Sbjct: 16 RLPPVKPRPKPPPPQPQPPPSRKKGQPLVDRRRPKKP 52
>06_01_0194 +
1503350-1503554,1504399-1504490,1504835-1504935,
1506186-1506276,1506616-1506674,1506764-1506884,
1506959-1507027,1507321-1507373,1507688-1507796,
1507895-1508065,1508148-1508306,1508561-1508650,
1508751-1508933,1509837-1510027,1510340-1510787
Length = 713
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 710 GXXGARXXXAGXAXARXGGGXXAGGXGXXPPXRGXTR 600
G G R G R GGG GG G RG R
Sbjct: 674 GGGGGRGRGGGGGGGRGGGGGGGGGRGGRGRGRGRGR 710
>05_06_0282 + 26915249-26915881
Length = 210
Score = 27.9 bits (59), Expect = 8.5
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = -2
Query: 460 PXPXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPPG 296
P GG + G G PP P + P G GPPPPG
Sbjct: 40 PSDGVVVGGAVEVEGGRSGNAPPSPRPHGRVTPLADGGGGGVLRRPPGRGPPPPG 94
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 23.4 bits (48), Expect(2) = 9.8
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +3
Query: 375 GXGTPXGGXXP--PXPFFXXHPPPXXQXGXGXPPXLPSXXXG 494
G G P P P P PPP G PP +P G
Sbjct: 260 GSGGPPRPPPPQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVG 301
Score = 22.6 bits (46), Expect(2) = 9.8
Identities = 10/30 (33%), Positives = 10/30 (33%)
Frame = +3
Query: 609 PPXGGXXPXPPGXXXXXXPXXGXXRPXXXG 698
PP GG P PP P P G
Sbjct: 298 PPVGGTQPPPPPPPLANGPPRSIPPPPMTG 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,153,200
Number of Sequences: 37544
Number of extensions: 409681
Number of successful extensions: 1600
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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