Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F21
(713 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 38 0.007
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.35
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.35
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.35
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 1.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 30 1.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 30 1.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 30 1.9
AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical ... 29 2.5
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/53 (37%), Positives = 21/53 (39%), Gaps = 5/53 (9%)
Frame = +2
Query: 332 PQNXXGXXPFXXXXXGGXPX-----GGXXPPXPLFXXTPPPPLXXGXGXXPXP 475
P G P GG P GG PP P+F PPPP G G P P
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQP 129
Score = 31.9 bits (69), Expect = 0.47
Identities = 23/64 (35%), Positives = 23/64 (35%), Gaps = 3/64 (4%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPX---GGXXPPXPFFXXHPPPXXQXGXGXP 467
P G PPP G P F G P GG PP P F PPP G G
Sbjct: 70 PNGFIPPPPG--PGGIPPPPPM-FAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVA 126
Query: 468 PXLP 479
P P
Sbjct: 127 PQPP 130
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 393 GGXXPPXPFFXXHPPPXXQXGXGXPPXLPS 482
GG PP P PPP G PP PS
Sbjct: 92 GGIPPPPPMMGGIPPPPPMFGAPPPPPPPS 121
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 392 GGXXPPXPLFXX-TPPPPLXXGXGXXPXPXF 481
GG PP P+F PPPP G P P F
Sbjct: 81 GGIPPPPPMFAGGIPPPPPMMGGIPPPPPMF 111
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 454 PXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
P GG GG PP G+P P G P GGPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITGGPPPP 745
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +3
Query: 303 GGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXLPS 482
GG PPP G P T G G P G PP P PP G PP P
Sbjct: 711 GGPPPPPGLPPIT--GGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPP 763
Query: 483 XXXGXP 500
G P
Sbjct: 764 PPGGCP 769
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 275 PXPXXXXPRGGGXPXXX---GXPQNXXGXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPPL 445
P P P GG P G P G P GG P PP F PPPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 446 XXG 454
G
Sbjct: 789 PPG 791
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 469 GGXPXPXXXXG--GGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
GG P P GG GG P G P P P G P GGPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPP 761
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 272 GPXPXXXXPRGGGXPXXXGXPQNXX--GXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPPL 445
GP P P GG P G P G P P G PP P PPPP
Sbjct: 725 GPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPP 777
Query: 446 XXGXGXXPXP 475
G P P
Sbjct: 778 GGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 454 PXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
P GG GG PP G+P P G P GGPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITGGPPPP 745
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +3
Query: 303 GGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXLPS 482
GG PPP G P T G G P G PP P PP G PP P
Sbjct: 711 GGPPPPPGLPPIT--GGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPP 763
Query: 483 XXXGXP 500
G P
Sbjct: 764 PPGGCP 769
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 275 PXPXXXXPRGGGXPXXX---GXPQNXXGXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPPL 445
P P P GG P G P G P GG P PP F PPPP
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Query: 446 XXG 454
G
Sbjct: 789 PPG 791
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 469 GGXPXPXXXXG--GGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
GG P P GG GG P G P P P G P GGPPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPP 761
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 272 GPXPXXXXPRGGGXPXXXGXPQNXX--GXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPPL 445
GP P P GG P G P G P P G PP P PPPP
Sbjct: 725 GPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPP 777
Query: 446 XXGXGXXPXP 475
G P P
Sbjct: 778 GGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.35
Identities = 18/52 (34%), Positives = 19/52 (36%)
Frame = -2
Query: 454 PXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
P GG GG PP G+P P G P GGPPPP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITGGPPPP 328
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/66 (34%), Positives = 23/66 (34%)
Frame = +3
Query: 303 GGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXLPS 482
GG PPP G P T G G P G PP P PP G PP P
Sbjct: 294 GGPPPPPGLPPIT--GGPPPPPPPGGLPPITGGPPPPP-----PPGGLPPISGGPPPPPP 346
Query: 483 XXXGXP 500
G P
Sbjct: 347 PPGGCP 352
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/63 (33%), Positives = 21/63 (33%), Gaps = 3/63 (4%)
Frame = +2
Query: 275 PXPXXXXPRGGGXPXXX---GXPQNXXGXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPPL 445
P P P GG P G P G P GG P PP F PPPP
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPP-PPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Query: 446 XXG 454
G
Sbjct: 372 PPG 374
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/59 (35%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -2
Query: 469 GGXPXPXXXXG--GGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
GG P P GG GG P G P P P G P GGPPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPP 344
Score = 28.3 bits (60), Expect = 5.8
Identities = 23/70 (32%), Positives = 23/70 (32%), Gaps = 2/70 (2%)
Frame = +2
Query: 272 GPXPXXXXPRGGGXPXXXGXPQNXX--GXXPFXXXXXGGXPXGGXXPPXPLFXXTPPPPL 445
GP P P GG P G P G P P G PP P PPPP
Sbjct: 308 GPPPPP--PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP-----PPPPP 360
Query: 446 XXGXGXXPXP 475
G P P
Sbjct: 361 GGFKGGPPPP 370
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -3
Query: 396 PPXGXPPXXXXKXGXXPXXFWGXPXXXGXPPPRGXXXXGXGPXXXXNFPXISPGNXAP 223
P G PP G P P G PPP G P P SP +P
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 349
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = -2
Query: 475 RXGGXPXPXXXXGGGCXXKKGXGGXXPPX--GVPXPXXXXKXXXPXXVLGXXPXGGGPPP 302
R G P P G GG PP G P P + P L GG PPP
Sbjct: 268 RTGSPPPPPT----GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Query: 301 PG 296
G
Sbjct: 324 AG 325
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +3
Query: 300 GGGGPPPX---GXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPP 470
G G PPP G P G P G PP P PPP G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 310
Query: 471 XLPSXXXG 494
LP G
Sbjct: 311 SLPPPQAG 318
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 469 GGXPXPXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
G P P G G P G P P P P GG PPP
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -3
Query: 396 PPXGXPPXXXXKXGXXPXXFWGXPXXXGXPPPRGXXXXGXGPXXXXNFPXISPGNXAP 223
P G PP G P P G PPP G P P SP +P
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 370
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = -2
Query: 475 RXGGXPXPXXXXGGGCXXKKGXGGXXPPX--GVPXPXXXXKXXXPXXVLGXXPXGGGPPP 302
R G P P G GG PP G P P + P L GG PPP
Sbjct: 289 RTGSPPPPPT----GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Query: 301 PG 296
G
Sbjct: 345 AG 346
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +3
Query: 300 GGGGPPPX---GXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPP 470
G G PPP G P G P G PP P PPP G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 331
Query: 471 XLPSXXXG 494
LP G
Sbjct: 332 SLPPPQAG 339
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 469 GGXPXPXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
G P P G G P G P P P P GG PPP
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = -3
Query: 396 PPXGXPPXXXXKXGXXPXXFWGXPXXXGXPPPRGXXXXGXGPXXXXNFPXISPGNXAP 223
P G PP G P P G PPP G P P SP +P
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSP 355
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/62 (32%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = -2
Query: 475 RXGGXPXPXXXXGGGCXXKKGXGGXXPPX--GVPXPXXXXKXXXPXXVLGXXPXGGGPPP 302
R G P P G GG PP G P P + P L GG PPP
Sbjct: 274 RTGSPPPPPT----GSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Query: 301 PG 296
G
Sbjct: 330 AG 331
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/68 (29%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Frame = +3
Query: 300 GGGGPPPX---GXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPP 470
G G PPP G P G P G PP P PPP G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTG 316
Query: 471 XLPSXXXG 494
LP G
Sbjct: 317 SLPPPQAG 324
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/57 (28%), Positives = 16/57 (28%)
Frame = -2
Query: 469 GGXPXPXXXXGGGCXXKKGXGGXXPPXGVPXPXXXXKXXXPXXVLGXXPXGGGPPPP 299
G P P G G P G P P P P GG PPP
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXL 476
P GG P P G F P GG PP PF PP P L
Sbjct: 477 PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFDPSGAPPSGMPPVPLPTDL 534
Query: 477 P 479
P
Sbjct: 535 P 535
Score = 28.7 bits (61), Expect = 4.4
Identities = 34/138 (24%), Positives = 34/138 (24%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXL 476
P GG P P G F P GG PP PF PP G PP
Sbjct: 312 PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG--PPGPFNPSGAPP-----SGGPPG- 363
Query: 477 PSXXXGXPAXXXXXXXXXXXXXXXXXXXGPXGXXXXXXXXLSXXPPXGGXXPXPPGXXXX 656
P G P GP G S PP P
Sbjct: 364 PFDPSGAP--PSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 421
Query: 657 XXPXXGXXRPXXXGPXXP 710
P P GP P
Sbjct: 422 PGPFNPSGAPPSGGPPGP 439
Score = 28.3 bits (60), Expect = 5.8
Identities = 34/138 (24%), Positives = 34/138 (24%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXL 476
P GG P P G F P GG PP PF PP G PP
Sbjct: 282 PSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGG--PPGPFNPSGAPP-----SGGPPG- 333
Query: 477 PSXXXGXPAXXXXXXXXXXXXXXXXXXXGPXGXXXXXXXXLSXXPPXGGXXPXPPGXXXX 656
P G P GP G S PP P
Sbjct: 334 PFDPSGAP--PSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGP 391
Query: 657 XXPXXGXXRPXXXGPXXP 710
P P GP P
Sbjct: 392 PGPFDPSGAPPSGGPPGP 409
Score = 27.9 bits (59), Expect = 7.6
Identities = 34/138 (24%), Positives = 34/138 (24%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXL 476
P GG P P G G F P GG P PF PP G PP
Sbjct: 177 PSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGG--PTGPFDPSGAPP-----SGGPPG- 228
Query: 477 PSXXXGXPAXXXXXXXXXXXXXXXXXXXGPXGXXXXXXXXLSXXPPXGGXXPXPPGXXXX 656
P G P GP G S PP P
Sbjct: 229 PFNPSGAP--PSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGP 286
Query: 657 XXPXXGXXRPXXXGPXXP 710
P P GP P
Sbjct: 287 PGPFDPSGAPPSGGPPGP 304
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXL 476
P GG P P G F P GG PP PF PP G PP
Sbjct: 417 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFNPSGAPP-----SGGPPG- 468
Query: 477 PSXXXGXP 500
P G P
Sbjct: 469 PFNPSGAP 476
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = +3
Query: 297 PGGGGPPPXGXXPKTXXGXXXFXFXXGXGTPXGGXXPPXPFFXXHPPPXXQXGXGXPPXL 476
P GG P P G F P GG PP PF PP G PP
Sbjct: 447 PSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG--PPGPFDPSGAPP-----SGGPPG- 498
Query: 477 PSXXXGXP 500
P G P
Sbjct: 499 PFNPSGAP 506
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Frame = +3
Query: 297 PGGG-GPPPXGXXPKTXXGXXXFXFXXGX--GTPXGGXXPPXPF--FXXHPPPXXQXGXG 461
PGGG GPPP + G G G P PP + PPP Q G G
Sbjct: 674 PGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYG 733
Query: 462 XPP 470
PP
Sbjct: 734 YPP 736
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/63 (34%), Positives = 24/63 (38%), Gaps = 5/63 (7%)
Frame = +3
Query: 297 PGGG-GPPPXGXXPKTXXGXXXFXFXXGX--GTPXGGXXPPXPF--FXXHPPPXXQXGXG 461
PGGG GPPP + G G G P PP + PPP Q G G
Sbjct: 674 PGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYG 733
Query: 462 XPP 470
PP
Sbjct: 734 YPP 736
>AL132858-2|CAB60476.2| 821|Caenorhabditis elegans Hypothetical
protein Y113G7A.3 protein.
Length = 821
Score = 29.5 bits (63), Expect = 2.5
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 7/55 (12%)
Frame = -2
Query: 439 GGGCXXKKGXGGXXPPXGVPX-PXXXXKXXXPXXVL------GXXPXGGGPPPPG 296
GGG + G P G P P P L G P GGGPP PG
Sbjct: 210 GGGLSQRPAAGAPGAPAGAPGAPMAMGSGAAPLGQLPGSGLPGGLPRGGGPPLPG 264
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +2
Query: 386 PXG-GXXPPXPLFXXTPPPPLXXGXGXXPXP 475
P G G P PL PPPP+ G G P P
Sbjct: 24 PVGFGVTPIMPLPYGAPPPPVGAGVGYAPPP 54
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/64 (32%), Positives = 22/64 (34%), Gaps = 8/64 (12%)
Frame = +2
Query: 308 GXPXXXGXPQNXXGXXPFXXXXXGGXPXG--GXXPPX------PLFXXTPPPPLXXGXGX 463
G P G PQ G P GG P G G PP P PPPP+ G
Sbjct: 319 GAPPPQGAPQQGFGAPP-QGPPQGGPPQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGN 377
Query: 464 XPXP 475
P
Sbjct: 378 FAPP 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,395,159
Number of Sequences: 27780
Number of extensions: 312119
Number of successful extensions: 1078
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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