Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F20
(835 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 9e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 47 2e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 46 3e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 4e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 4e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.006
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 51.6 bits (118), Expect = 9e-09
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +1
Query: 76 IASAAECENATSLSLMIDSLLATYDRGSPPDSK----IVVNLTLHLRHA---NIRESEST 234
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 235 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 408
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 409 VSNNGSVSW 435
+ G V W
Sbjct: 127 LHYTGKVLW 135
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.2 bits (107), Expect = 2e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +1
Query: 94 CENATSLSLMIDSLLATYDRGSPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 252
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 253 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 426
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 427 VSW 435
V W
Sbjct: 137 VEW 139
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRARVSNNGS 426
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.4 bits (105), Expect = 3e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 385 GDYALRARVSNNGS 426
G Y V++NGS
Sbjct: 153 GTYQTNVVVTHNGS 166
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.4 bits (105), Expect = 3e-07
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 12/135 (8%)
Frame = +1
Query: 67 TCAIASAAECENATSLSLMIDSLLATYDRGSPP----DSKIVVNLTLHLRH---ANIRES 225
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 226 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 399
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 400 ---RARVSNNGSVSW 435
+A + + G V W
Sbjct: 121 IMTKAILHHTGKVVW 135
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.4 bits (105), Expect = 3e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +1
Query: 121 MIDSLLATYDRGSPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 435
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 46.0 bits (104), Expect = 4e-07
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGS 426
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 45.6 bits (103), Expect = 6e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +1
Query: 121 MIDSLLATYDRGSPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 435
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGS 426
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGS 426
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGS 426
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGS 426
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Frame = +1
Query: 211 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 384
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 385 GDYALRARVSNNGS 426
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Frame = +1
Query: 94 CENATSLSLMIDS---LLATYDRGSPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 258
C++ TS S + L YDR P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 259 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 360
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.0 bits (99), Expect = 2e-06
Identities = 33/109 (30%), Positives = 43/109 (39%), Gaps = 8/109 (7%)
Frame = +1
Query: 133 LLATYDRGSPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 297
LL YD G P + V L L H ++ E + + W D L WNA
Sbjct: 13 LLDGYDAGVRPAENSSQPLAVVFGLSLHHIIDVDEKNQILTTNCWVTQIWTDHHLKWNAS 72
Query: 298 EW-GCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSW 435
E+ G V R+WRPD +L N A + VS+ G V W
Sbjct: 73 EFAGIRVIRVPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +1
Query: 100 NATSLSLMIDSLLATYDRGSPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 267
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 268 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +1
Query: 121 MIDSLLATYDRGSPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 285
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 286 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 435
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 42.7 bits (96), Expect = 4e-06
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
Frame = +1
Query: 73 AIASAAECENATSLSLMIDSLLATYDRGSPP----DSKIVVNLTLHLRHA-NIRESESTV 237
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 238 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 411
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 412 SNNGS 426
NNG+
Sbjct: 131 KNNGT 135
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.9 bits (94), Expect = 7e-06
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Frame = +1
Query: 172 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 345
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 346 PDVVLLNAAATTAGDYALRAR----VSNNGSVSW 435
PD+VL N A G+Y +R + + NG V W
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLW 141
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.006
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +1
Query: 109 SLSLMIDSLLATYDRGSPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 273
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 274 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 366
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 318 PSAAAPFPCVPTQS 277
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.132 0.424
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,981
Number of Sequences: 438
Number of extensions: 3889
Number of successful extensions: 53
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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