Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_F16
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0183 - 21681673-21682524                                         32   0.61 
01_07_0197 + 41912207-41912652,41913226-41913800,41913828-419157...    29   4.3  
03_05_0180 + 21593763-21594605                                         28   10.0 
03_05_0179 - 21583234-21584336,21586274-21586358,21586665-215867...    28   10.0 

>03_05_0183 - 21681673-21682524
          Length = 283

 Score = 31.9 bits (69), Expect = 0.61
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +2

Query: 584 SQAFIATLLFDPSMSALPIIAKQHSPSVGLSXIKRERELGLNRRETG 724
           SQAF A LL D + +A+P++  Q  P+   +  + E E    RR TG
Sbjct: 229 SQAFSAVLLADANRAAIPVVVVQKRPAPE-TETETEEEPPRQRRRTG 274


>01_07_0197 +
           41912207-41912652,41913226-41913800,41913828-41915748,
           41915836-41916049,41916143-41916394,41916469-41916528,
           41916646-41916776,41916898-41917012,41917084-41917239
          Length = 1289

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 523 YKEFLARG-ARKVTTGITGLWQPSVHSDVAF*SFDVG 630
           YK F A G  RKV  GIT  + PS+  D+AF S  +G
Sbjct: 633 YKIFQAFGLVRKVEKGITRWYYPSMLDDLAFDSAALG 669


>03_05_0180 + 21593763-21594605
          Length = 280

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 584 SQAFIATLLFDPSMSALPIIAKQHSPSVGLSXIKRERELGLNRRETG 724
           SQAF A LL D + +A P++     P+      ++++E    RR TG
Sbjct: 229 SQAFSAVLLADANRAASPVVVVHKRPTPETEK-EQDQEPPRQRRRTG 274


>03_05_0179 - 21583234-21584336,21586274-21586358,21586665-21586713,
            21586801-21586874,21586958-21587050,21587120-21587174,
            21587348-21587421,21587702-21587814,21587911-21588168,
            21588915-21589012,21589139-21589256,21589754-21589848,
            21590001-21590159,21590336-21590525,21590881-21591021,
            21591142-21591176,21591659-21591699
          Length = 926

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 16/47 (34%), Positives = 25/47 (53%)
 Frame = +2

Query: 584  SQAFIATLLFDPSMSALPIIAKQHSPSVGLSXIKRERELGLNRRETG 724
            SQAF A LL D + +A P++     P+      ++++E    RR TG
Sbjct: 875  SQAFSAVLLADANRAASPVVVVHKRPTPETEK-EQDQEPPRQRRRTG 920


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,793,669
Number of Sequences: 37544
Number of extensions: 381253
Number of successful extensions: 751
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 751
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)