Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F14
(800 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_1010 - 10215625-10216335,10216372-10216473 30 2.5
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 3.3
02_01_0219 - 1437685-1437723,1437932-1438091,1438385-1438514,143... 29 3.3
01_01_0448 - 3332238-3332330,3332414-3332481,3332570-3332618,333... 29 4.3
04_03_0806 + 19857675-19859135 29 5.7
04_01_0041 - 464695-464850,467485-469029 29 5.7
01_05_0227 - 19512866-19514983 29 5.7
04_04_1682 + 35332907-35333720,35334583-35335202 28 7.5
02_05_0788 + 31758119-31758384,31758482-31758634,31759385-317595... 28 7.5
02_05_0158 - 26362259-26362695,26363732-26363903 28 7.5
12_02_0985 + 25052753-25053691 28 9.9
09_01_0183 - 2652173-2653924 28 9.9
09_01_0061 + 948663-948708,949638-949993 28 9.9
>08_01_1010 - 10215625-10216335,10216372-10216473
Length = 270
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/61 (26%), Positives = 24/61 (39%)
Frame = +1
Query: 538 PPLRSRATSTRSSNPRFHTPTTPDLTSISINPLNXVLKRSSRPGLKPPXVIXXSHQRISP 717
PP R+ + + S P+ H +PD T + P P PP + +SP
Sbjct: 140 PPRRAASPNYTPSTPQRHA-ASPDYTPSTPTPPRRAASLDYTPSTPPPRAASPDYTPLSP 198
Query: 718 P 720
P
Sbjct: 199 P 199
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 538 PPLRSRATSTRSSNPRFHTPTTPDLTSISINPLNXVLKRSSRPGLKPP 681
PP RSR T R+ RF T +TPD ++ +P ++ S+ P PP
Sbjct: 311 PPARSRRTPPRT---RFSTGSTPDTKQVT-SPSPRPVQPSNAPPPPPP 354
>02_01_0219 -
1437685-1437723,1437932-1438091,1438385-1438514,
1438627-1438696,1439264-1439407,1439771-1439837,
1439970-1440019,1440386-1440559,1440881-1440934,
1441008-1441112
Length = 330
Score = 29.5 bits (63), Expect = 3.3
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +2
Query: 284 TETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSL--KIPVTVDLCWTTADVT 457
TE +N V V L SS GY D + ++ V + K+ V +D TAD++
Sbjct: 167 TEAGANRVLVCDLH--SSQAMGYFDIPVDHVYGQVMNLIGDVRGKVAVMMDDMIDTADIS 224
Query: 458 VEGVNVLATPSSSRITIGGLALMHQ 532
+ +N+L P G L+HQ
Sbjct: 225 LPNINILMKPIKLGTIAKGAELLHQ 249
>01_01_0448 -
3332238-3332330,3332414-3332481,3332570-3332618,
3332716-3332798,3332900-3333023,3333389-3333486,
3333555-3333634,3333712-3333782,3333872-3333953,
3334158-3334237,3334365-3334416,3334843-3334958
Length = 331
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +1
Query: 544 LRSRATSTRSSNPRFHTPTTP 606
+ + +T+TR S PR H PTTP
Sbjct: 1 MAASSTATRLSPPRLHAPTTP 21
>04_03_0806 + 19857675-19859135
Length = 486
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 564 NPIIKSPIPYTNHPRLNIHFHQSPEXRTKKEFAPGVKASXCHXXLPSAYLTPSSL 728
NP + P PY + PRL +H H+ R A + A H +P+ P +L
Sbjct: 6 NPPLPLPPPYDSLPRLLLHHHRRLPRRRLVLAAHALAAVAGHLTVPAPPHHPHAL 60
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 5.7
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 245 IIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPS-APSLKIPV 421
+I R + D++ T +SN + V +LP VSS + Y D ++ + P P ++ V
Sbjct: 40 LISVFRPFTDVSLTLCRSNYIGVTNLPIVSSECEAYYDDFVSGADFTARPQVVPPWRLAV 99
Query: 422 TVD 430
+D
Sbjct: 100 PLD 102
>01_05_0227 - 19512866-19514983
Length = 705
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -3
Query: 462 STVTSAVVQQRSTVTGILRLGAEGKTTASRL 370
S +T + +QQ + ++ LG GKTT ++L
Sbjct: 18 SKLTESSIQQNIKIVSVIGLGGSGKTTLAKL 48
>04_04_1682 + 35332907-35333720,35334583-35335202
Length = 477
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = +2
Query: 497 RITIGGLALM--HQATLPCDLGLHQPDH 574
R T G L+ H ATL CDLGLH H
Sbjct: 337 RCTADGNELLRFHCATLSCDLGLHGATH 364
>02_05_0788 +
31758119-31758384,31758482-31758634,31759385-31759509,
31759650-31759678,31760943-31761008,31761059-31761125,
31761226-31761370,31761404-31761451,31762014-31762182,
31762645-31762779,31762858-31763064,31763608-31763735,
31763815-31763866,31764046-31764060,31764502-31764609
Length = 570
Score = 28.3 bits (60), Expect = 7.5
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +2
Query: 236 QRLIIPFQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 415
Q I + ++ L N TV + N + GY+ +N+ + PSLK
Sbjct: 198 QVFCIVLEMFFYQLLQLLKVPNEKTVNVIENAIQTLPGYQPPKHINIGEYISSHVPSLK- 256
Query: 416 PVTVDLCWTTADVTVEGVNVLATPSS 493
D C T ++ +EG++ L S+
Sbjct: 257 ----DFCEPTVEM-LEGMSALKALST 277
>02_05_0158 - 26362259-26362695,26363732-26363903
Length = 202
Score = 28.3 bits (60), Expect = 7.5
Identities = 19/35 (54%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = +1
Query: 520 PYASSHPPLRSRAT-STRSSNPRFHTP-TTPDLTS 618
P ASS PP S AT +T SS+P TP +TPD T+
Sbjct: 132 PTASSSPP--STATPATPSSDPGMDTPSSTPDATT 164
>12_02_0985 + 25052753-25053691
Length = 312
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = -3
Query: 525 IRARPPIVMREDEGVASTLTPSTVTSAVVQQRSTVTGILRLGAEGKTTASRLTRYASR*P 346
+ +R + +R D S+ + +T S + S + GAEG TTAS LT S P
Sbjct: 127 VSSRTGLFLRGDCHRNSSASNATNCSIPAETMSRMVPTASCGAEGNTTASALTCVTSTSP 186
>09_01_0183 - 2652173-2653924
Length = 583
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -2
Query: 679 EALTPGANSFLVRXSGD*WKWMLSLGW 599
EA PGA L R SG+ K +LS GW
Sbjct: 555 EAEVPGAKKALQRISGNRLKSLLSRGW 581
>09_01_0061 + 948663-948708,949638-949993
Length = 133
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +2
Query: 29 LCLXSFLAASAIPSLVNAFSSSKPPQTDNPSAR 127
LC+ + PS N +SS KPP T P+ R
Sbjct: 91 LCVIHVSSKDHRPSQDNPYSSDKPPPTSPPAQR 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,390,800
Number of Sequences: 37544
Number of extensions: 451108
Number of successful extensions: 1181
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1181
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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