Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_F14
         (800 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.4  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.4  
AY052101-1|AAK93525.1|  607|Drosophila melanogaster SD04973p pro...    29   9.8  
AE013599-3005|AAF57474.1|  567|Drosophila melanogaster CG8929-PC...    29   9.8  
AE013599-3004|AAF57475.2|  607|Drosophila melanogaster CG8929-PB...    29   9.8  
AE013599-3003|AAF57473.2|  607|Drosophila melanogaster CG8929-PA...    29   9.8  

>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.4
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 232  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 357
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AY052101-1|AAK93525.1|  607|Drosophila melanogaster SD04973p
           protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 529 SSHPPLRSRATSTRSSNPRFHTPTTPDLTSISIN---PLNXVLKRSSRPGLKPP 681
           SS   LR +  ++RS   R  +P  P  +S ++    P+  +L RS RP   PP
Sbjct: 203 SSSSSLRRKPNASRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPP 256


>AE013599-3005|AAF57474.1|  567|Drosophila melanogaster CG8929-PC,
           isoform C protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 529 SSHPPLRSRATSTRSSNPRFHTPTTPDLTSISIN---PLNXVLKRSSRPGLKPP 681
           SS   LR +  ++RS   R  +P  P  +S ++    P+  +L RS RP   PP
Sbjct: 163 SSSSSLRRKPNASRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPP 216


>AE013599-3004|AAF57475.2|  607|Drosophila melanogaster CG8929-PB,
           isoform B protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 529 SSHPPLRSRATSTRSSNPRFHTPTTPDLTSISIN---PLNXVLKRSSRPGLKPP 681
           SS   LR +  ++RS   R  +P  P  +S ++    P+  +L RS RP   PP
Sbjct: 203 SSSSSLRRKPNASRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPP 256


>AE013599-3003|AAF57473.2|  607|Drosophila melanogaster CG8929-PA,
           isoform A protein.
          Length = 607

 Score = 28.7 bits (61), Expect = 9.8
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +1

Query: 529 SSHPPLRSRATSTRSSNPRFHTPTTPDLTSISIN---PLNXVLKRSSRPGLKPP 681
           SS   LR +  ++RS   R  +P  P  +S ++    P+  +L RS RP   PP
Sbjct: 203 SSSSSLRRKPNASRSPLGRRRSPPLPPPSSSAMEKRGPVAHILPRSKRPPSPPP 256


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,366,133
Number of Sequences: 53049
Number of extensions: 727386
Number of successful extensions: 2694
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2694
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3736869864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)