Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F13
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 241 4e-64
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 238 4e-63
09_04_0594 - 18831011-18831360,18831562-18832111,18832364-188334... 29 4.1
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 29 4.1
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 5.4
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 29 5.4
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 28 7.1
09_06_0103 + 20873310-20873382,20873530-20873735 28 7.1
05_03_0609 - 16161801-16162848,16163525-16163682,16163806-161638... 28 9.4
04_04_0907 + 29304830-29305030,29305296-29305547 28 9.4
01_06_0575 - 30357556-30357582,30357698-30357944,30358039-303581... 28 9.4
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 241 bits (590), Expect = 4e-64
Identities = 115/211 (54%), Positives = 140/211 (66%)
Frame = +1
Query: 61 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRAWE 240
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL + WE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 241 KLVLAARAVVAIENPADVFVISPRPFGQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAF 420
KL LAAR +VAIENP D+ V S RP+GQRAVLKFA +TGA IAGR P FTNQ+Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 421 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLXFVDIAIPCNTXSSHSIGLMWW 600
EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+ +VDI IP N +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180
Query: 601 LLAXEXAXASXCAPXDXXWDXXXXXXFYRDP 693
LLA WD FYRDP
Sbjct: 181 LLARMVLQMRGTILPGHKWDVMVDLFFYRDP 211
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 238 bits (582), Expect = 4e-63
Identities = 112/200 (56%), Positives = 134/200 (67%)
Frame = +1
Query: 94 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRAWEKLVLAARAVVA 273
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL + WEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 274 IENPADVFVISPRPFGQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDP 453
IENP D+ V S RP+GQRAVLKFA +TGA IAGR P FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 454 AQDHQPITEASYVNIPVIALCNTDSPLXFVDIAIPCNTXSSHSIGLMWWLLAXEXAXASX 633
DHQPI E++ NIP IA C+TDSP+ +VDI IP N SIG ++WLLA
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191
Query: 634 CAPXDXXWDXXXXXXFYRDP 693
WD FYRDP
Sbjct: 192 TILPGHKWDVMVDLFFYRDP 211
>09_04_0594 -
18831011-18831360,18831562-18832111,18832364-18833406,
18833496-18833760,18835194-18835340,18835431-18835511,
18835626-18835804,18835935-18836093,18836269-18836398,
18836935-18837094,18837337-18837419,18837865-18837915,
18838035-18838151,18838273-18838359
Length = 1133
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +1
Query: 4 WL*VHFASQWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETY 183
+L V F ++W + + T + G L +ED+ K L+A H E + MET+
Sbjct: 237 YLGVPFIAEWFRNKGHYIKSQVTAATGAIALMQLQEDLKKHLSAECHYTEEELEAYMETH 296
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 168 PDGDLCLQTTC*WYPCDQLASCLGKTCSGCSCCRSH 275
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 161 TFSAPRWVVAASILVTSSSLRASTSNP 81
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +3
Query: 114 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASCLGKTCSGCSCCRSHREPR*C 293
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 294 VRHLTTALRSACCTEVCR 347
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 28.3 bits (60), Expect = 7.1
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -1
Query: 440 IKRRGSRNAAWI--WLVKAXGAKRPAIGVAPVCAANFS-TAR*PKGRGEMTNTSAGF 279
+ R G R+ + W ++ G+ A G AP C + S G+G + N SAG+
Sbjct: 223 VNRTGDRSVPTVLDWAIRGNGSCSSATG-APACVSAHSYCVNATNGKGYLCNCSAGY 278
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 339 VCRAHRCYAYC---GTFRTXCFY*PDPSCIP*TSSLDCI 446
+CR+ RC YC G R C + DPS ++ +C+
Sbjct: 45 LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83
>05_03_0609 -
16161801-16162848,16163525-16163682,16163806-16163835,
16164242-16164323,16164599-16164672
Length = 463
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 606 QQPPHQTNRVGRXGVAWDSNVHKX*WGVCVAQS 508
+ PP Q RVG GV H WG C +S
Sbjct: 17 EMPPVQPGRVGLWGVTVRCRDHGRCWGFCWVES 49
>04_04_0907 + 29304830-29305030,29305296-29305547
Length = 150
Score = 27.9 bits (59), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 451 PAQDHQPITE-ASYVNIPVIALCNTDSPLXFVDIAIPCNT 567
P D + E A+ NIP+I L + D P +IA C T
Sbjct: 23 PESDRPRLAEVATDSNIPLIDLASPDKPRVIAEIAQACRT 62
>01_06_0575 -
30357556-30357582,30357698-30357944,30358039-30358161,
30358275-30358301,30358475-30358633,30359764-30359948,
30360225-30360293,30360432-30362354,30363018-30363339,
30363506-30363543
Length = 1039
Score = 27.9 bits (59), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 204 WYPCDQLASCLGKTCSGCSCCRSHREP 284
++PC +GKT S C + HR P
Sbjct: 615 YHPCQPTVRLMGKTVSVCERSKEHRVP 641
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,833,263
Number of Sequences: 37544
Number of extensions: 453658
Number of successful extensions: 1032
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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