Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F13
(767 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 256 1e-68
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 38 0.010
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 38 0.010
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.042
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.042
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.042
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 29 3.6
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 29 3.6
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 29 3.6
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 29 4.8
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 28 6.4
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 28 6.4
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 28 6.4
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 28 6.4
Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical p... 28 8.4
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 28 8.4
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 28 8.4
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 8.4
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 8.4
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 28 8.4
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 256 bits (628), Expect = 1e-68
Identities = 114/181 (62%), Positives = 140/181 (77%)
Frame = +1
Query: 73 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRAWEKLVL 252
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+++ WEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 253 AARAVVAIENPADVFVISPRPFGQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPR 432
AARA+ A+ENPADV V+S RP+ QRA+LKFAAHTGAT I GRF+P TNQIQ F+EPR
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120
Query: 433 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLXFVDIAIPCNTXSSHSIGLMWWLLAX 612
LL++ DP DHQ +TEASYV +PVI+ NT+SPL +DI +PCN SIGLMWW+LA
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180
Query: 613 E 615
E
Sbjct: 181 E 181
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 37.5 bits (83), Expect = 0.010
Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 231 CLGKTCSGCSCCRSHREPR*CV--RHLTTALRSACCTEVCRAHR-CYAYCG 374
C G C GC CCR PR C R T R+ CCT C R C CG
Sbjct: 79 CCGCGC-GCCCCR----PRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/49 (36%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +3
Query: 231 CLGKTCSGCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHR-CYAYCG 374
C G GC CC + C R T R+ CCT C R C CG
Sbjct: 75 CGGGGGGGCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 35.5 bits (78), Expect = 0.042
Identities = 23/79 (29%), Positives = 33/79 (41%)
Frame = +3
Query: 231 CLGKTCSGCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHRCYAYCGTFRTXCFY*PDP 410
C G++ S SCC S C+ +S+C T +C+ +C C T P
Sbjct: 34 CCGRSSS--SCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSITISSGP 90
Query: 411 SCIP*TSSLDCIGPCTRPS 467
SC S+ C CT P+
Sbjct: 91 SCSSCQSA--CSSACTTPT 107
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 252 GCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHR-CYAYCG 374
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 252 GCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHR-CYAYCG 374
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.042
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +3
Query: 252 GCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHR-CYAYCG 374
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 252 GCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHRCYAYCGTFRTXC 392
GC CCR PR C R CC CR C C R C
Sbjct: 65 GCCCCR----PRCCC-----CCRPKCCCTCCRTCCCTRCCTCCRPCC 102
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 380 SHXVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 532
SH V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3338 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3388
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 380 SHXVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 532
SH V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 380 SHXVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 532
SH V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 252 GCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHRCYAYCGTFRTXC 392
GC CCR PR C R CC CR C C R C
Sbjct: 67 GCCCCR----PRCCC-----CCRPKCCCTCCRTCCCTRCCTCCRPCC 104
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = +3
Query: 252 GCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHRCYAYCGTFRTXC 392
GC CCR PR C R CC CR C C R C
Sbjct: 70 GCCCCR----PRCCC-----CCRPKCCCTCCRTCCCTRCCTCCRPCC 107
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 380 SHXVL-LLTRSKLHSVNLVS*LYWTLHKTINPLLKLHMSTFL*LLCATQTPH 532
SH V+ + + +LHS+NL + LYW L + + + S F+ +LC H
Sbjct: 3349 SHEVMNRVIKKQLHSLNLFNWLYW-LPQLVTDVRYKPNSNFVLILCKMAAAH 3399
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 28.7 bits (61), Expect = 4.8
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 304 SPRPFGQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDP--AQDHQPIT 477
+P P A + A GATP A A T+Q Q + P+ +V P A QP++
Sbjct: 93 APPPPASSAPIVGAPRQGATPQAAPATTPATTSQHQQSIATPKPPVVRPPSAATQQQPVS 152
Query: 478 EAS 486
S
Sbjct: 153 VTS 155
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 132 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASCLGKTCSGCSC-CRSHREPR*CVRHLT 308
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 309 TALRSACCTEV-CRAHRCYAYCGT 377
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 28.3 bits (60), Expect = 6.4
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +2
Query: 299 SSHHGPSVSVLY*SLPRTPVLRLLRDVSHXVLLLTRSKLHSVNLVS*LYWTLHKTI 466
S+HH V +L S P L++ + + + R K H +N S Y TL T+
Sbjct: 100 SAHHMNRVFLLLNSYPENSNLKIEQMLREETSFVARQKYHEMNWDSWYYITLVSTV 155
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 132 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASCLGKTCSGCSC-CRSHREPR*CVRHLT 308
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 309 TALRSACCTEV-CRAHRCYAYCGT 377
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/84 (25%), Positives = 33/84 (39%), Gaps = 2/84 (2%)
Frame = +3
Query: 132 CNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASCLGKTCSGCSC-CRSHREPR*CVRHLT 308
C GR+C TC PC++ S TC G SC C+++ E C R
Sbjct: 453 CKPGFGGRRCERCAPGYRNHPTCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKA 512
Query: 309 TALRSACCTEV-CRAHRCYAYCGT 377
+ + + C+ C+ + T
Sbjct: 513 GTIHLSASNPLGCQPCFCFGHSST 536
>Z98877-15|CAB63407.3| 572|Caenorhabditis elegans Hypothetical
protein Y69H2.10a protein.
Length = 572
Score = 27.9 bits (59), Expect = 8.4
Identities = 20/91 (21%), Positives = 36/91 (39%)
Frame = +3
Query: 240 KTCSGCSCCRSHREPR*CVRHLTTALRSACCTEVCRAHRCYAYCGTFRTXCFY*PDPSCI 419
K GC+C +++ + + + R T C + ++ C CF +PSC
Sbjct: 488 KCLPGCTCRPAYKRDSDSGQCVHS--RQCFGTTKCSDNEAWSKCHNCEKVCFQTANPSCK 545
Query: 420 P*TSSLDCIGPCTRPSTHY*SFICQHSCDCF 512
S C+ +R +T +C + CF
Sbjct: 546 ACWSGCGCLDGFSRSTTG----LCVETAKCF 572
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3127 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3180
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3025 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3078
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3026 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3079
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3108 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3161
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +1
Query: 319 GQRAVLKFAAHTGATPIAGRFAPXAFTNQIQAAFREPRLLIVLDPAQDHQPITE 480
G L+ A H G+F A +I A + RL ++ P++ Q +TE
Sbjct: 3139 GDLLTLRDALHQNKIDSNGKFVEGANRLKISDAVKSGRLTVIASPSEAVQAVTE 3192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,096,755
Number of Sequences: 27780
Number of extensions: 369795
Number of successful extensions: 884
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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