Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F12
(1183 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical... 34 0.17
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 33 0.30
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 33 0.52
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 32 0.69
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 32 0.69
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 32 0.69
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 32 0.69
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 32 0.91
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 31 1.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 31 1.2
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 31 1.2
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.6
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 1.6
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 1.6
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 1.6
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 1.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 3.7
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 30 3.7
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 24 4.1
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 29 4.8
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 29 4.8
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 4.8
AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (... 29 4.8
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 24 6.0
Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical pr... 29 6.4
Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical pr... 29 6.4
U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (gr... 29 6.4
Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical pr... 29 8.5
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 8.5
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 8.5
>AC025721-11|AAK29900.1| 78|Caenorhabditis elegans Hypothetical
protein Y48G8AL.12 protein.
Length = 78
Score = 34.3 bits (75), Expect = 0.17
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2
Query: 797 FFFXXXGGGGGGXXXXXPPPPP 862
F F GGGGGG PPPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
Score = 32.3 bits (70), Expect = 0.69
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPP 817
F GGGGGG PPPPP
Sbjct: 19 FPSAGGGGGGCGCGAPPPPP 38
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -1
Query: 862 GGGGGGXXXXXPPPPP 815
GGGGGG PPPPP
Sbjct: 23 GGGGGGCGCGAPPPPP 38
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 800 FFXXXGGGGGGXXXXXPPPPPP 865
F GGGGG PPPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
Score = 28.7 bits (61), Expect = 8.5
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 885 FXFFXXGGGGGGGXXXXXPPPP 820
F F GGGGGG PPPP
Sbjct: 17 FLFPSAGGGGGGCGCGAPPPPP 38
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 33.5 bits (73), Expect = 0.30
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 864 GGGGGGXXXXXPPPPPP 814
GGGGGG PPPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 33.5 bits (73), Expect = 0.30
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPP 865
GGGGGG PPPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 33.1 bits (72), Expect = 0.39
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPP 817
GGGGGGG PPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
Score = 31.9 bits (69), Expect = 0.91
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
G GGGGGG PPPPP
Sbjct: 32 GCGGGGGGGGCCAPPPPP 49
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPPP 868
GGGGG PPPPPP
Sbjct: 34 GGGGGGGGCCAPPPPPP 50
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2
Query: 797 FFFXXXGGGGGGXXXXXPPPPPP 865
F F GGGGGG PPPPPP
Sbjct: 16 FLFNLLGGGGGG--CCAPPPPPP 36
Score = 30.7 bits (66), Expect = 2.1
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 885 FXFFXXGGGGGGGXXXXXPPPPPP 814
F F GGGGGG PPPPPP
Sbjct: 16 FLFNLLGGGGGG---CCAPPPPPP 36
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 32.3 bits (70), Expect = 0.69
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 803 FXXXGGGGGGXXXXXPPPPPP 865
F GGGGG PPPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
Score = 31.9 bits (69), Expect = 0.91
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPPP 814
F GGGGG PPPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
Score = 31.5 bits (68), Expect = 1.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 821 GGGGXXXXXPPPPPPP 868
GGGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 879 FFXXGGGGGGGXXXXXPPPPP 817
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 32.3 bits (70), Expect = 0.69
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 803 FXXXGGGGGGXXXXXPPPPPP 865
F GGGGG PPPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
Score = 31.9 bits (69), Expect = 0.91
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPPP 814
F GGGGG PPPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
Score = 31.5 bits (68), Expect = 1.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 821 GGGGXXXXXPPPPPPP 868
GGGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 879 FFXXGGGGGGGXXXXXPPPPP 817
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 32.3 bits (70), Expect = 0.69
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 803 FXXXGGGGGGXXXXXPPPPPP 865
F GGGGG PPPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
Score = 31.9 bits (69), Expect = 0.91
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPPP 814
F GGGGG PPPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
Score = 31.5 bits (68), Expect = 1.2
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 821 GGGGXXXXXPPPPPPP 868
GGGG PPPPPPP
Sbjct: 22 GGGGGCGCAPPPPPPP 37
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 879 FFXXGGGGGGGXXXXXPPPPP 817
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPP 37
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 32.3 bits (70), Expect = 0.69
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPPXXKXXKKKK 895
G GGG PPPPPPP +KK+
Sbjct: 56 GYGGGYGCGIPPPPPPPPQCGCGRKKR 82
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -2
Query: 867 GGGG---GGGXXXXXPPPPPP 814
GGGG GGG PPPPPP
Sbjct: 51 GGGGCGYGGGYGCGIPPPPPP 71
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPP 814
G GGG G PPPPPP
Sbjct: 56 GYGGGYGCGIPPPPPPPP 73
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 31.9 bits (69), Expect = 0.91
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 803 FXXXGGGGGGXXXXXPPPPPPP 868
F GGGGG PPPPP P
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPSP 38
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPP 817
F GGGGG PPPPP
Sbjct: 17 FLLPSGGGGGCGCAPPPPPP 36
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 858 GGGGXXXXXPPPPPP 814
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPP 814
GGGGGGG PPPPPP
Sbjct: 31 GGGGGGGDAA--PPPPPP 46
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPP 865
GGGGG PPPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPP 862
GGGGGG PPPPP
Sbjct: 31 GGGGGGGDAAPPPPPP 46
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%)
Frame = -1
Query: 868 GGG--GGGGGXXXXXPPPPP 815
GGG GGGGG PPPPP
Sbjct: 26 GGGYSGGGGGGGDAAPPPPP 45
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPPXXXKKKXXXKXXXP 772
GGGGGGG PP PP + + K P
Sbjct: 632 GGGGGGGPTGPPAPPKPPAKPRGRPPRKSISP 663
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPP 868
GGGGGG P PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPPPXXK 877
GGGGG PP PP P K
Sbjct: 632 GGGGGGGPTGPPAPPKPPAK 651
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 31.5 bits (68), Expect = 1.2
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPPXXXKKKXXXKXXXP 772
GGGGGGG PP PP + + K P
Sbjct: 632 GGGGGGGPTGPPAPPKPPAKPRGRPPRKSISP 663
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPP 868
GGGGGG P PP PP
Sbjct: 632 GGGGGGGPTGPPAPPKPP 649
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPPPXXK 877
GGGGG PP PP P K
Sbjct: 632 GGGGGGGPTGPPAPPKPPAK 651
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPP 814
G GG GG PPPPPP
Sbjct: 200 GSGGSGGGSGRFPPPPPP 217
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GG GG GG PPPPP
Sbjct: 199 GGSGGSGGGSGRFPPPPP 216
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPP 865
GG GG PPPPPP
Sbjct: 202 GGSGGGSGRFPPPPPP 217
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect(2) = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 877 FXXGGGGGGGG 845
+ GG GGGGG
Sbjct: 82 YSTGGAGGGGG 92
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect(2) = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 877 FXXGGGGGGGG 845
+ GG GGGGG
Sbjct: 82 YSTGGAGGGGG 92
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect(2) = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 877 FXXGGGGGGGG 845
+ GG GGGGG
Sbjct: 82 YSTGGAGGGGG 92
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect(2) = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GGGGGGGG P PP
Sbjct: 90 GGGGGGGGCDGCCNPGPP 107
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1
Query: 877 FXXGGGGGGGG 845
+ GG GGGGG
Sbjct: 82 YSTGGAGGGGG 92
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPPP 868
GGGGG PPPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 818 GGGGGXXXXXPPPPPPP 868
GGGGG PPPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 864 GGGGGGXXXXXPPPPPP 814
GGGGG PPPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPP 865
GGGGG PPPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 864 GGGGGGXXXXXPPPPPP 814
GGGGG PPPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPP 865
GGGGG PPPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPP 817
GGGGG G PPPPP
Sbjct: 43 GGGGGCGGGCAPPPPPP 59
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPP 817
GGGGG G PPPPP
Sbjct: 100 GGGGGCGGGCAPPPPPP 116
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPP 814
G GGGGG PPPPP
Sbjct: 41 GCGGGGGCGGGCAPPPPP 58
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPPP 814
G GGGGG PPPPP
Sbjct: 98 GCGGGGGCGGGCAPPPPP 115
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GG GGGGG PPPP
Sbjct: 40 GGCGGGGGCGGGCAPPPP 57
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GG GGGGG PPPP
Sbjct: 97 GGCGGGGGCGGGCAPPPP 114
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +2
Query: 815 GGGGGGXXXXX---PPPPPPP 868
GGGGGG PPPPPPP
Sbjct: 83 GGGGGGYGRPQGYVPPPPPPP 103
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -2
Query: 867 GGGGGGGXXXXX---PPPPPP 814
GGGGGGG PPPPPP
Sbjct: 82 GGGGGGGYGRPQGYVPPPPPP 102
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPPP 814
+ GGGGG G PPPPP
Sbjct: 81 YGGGGGGGYGRPQGYVPPPPP 101
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPP 868
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPP 308
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GGGGG GG PPP P
Sbjct: 61 GGGGGCGGGGGCAPPPAP 78
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPP 868
GGGG PPPPPPP
Sbjct: 291 GGGGYSAPAAAPPPPPPP 308
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1
Query: 868 GGGGGGGGXXXXXPPPPP 815
GGGGG GG PPP P
Sbjct: 61 GGGGGCGGGGGCAPPPAP 78
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 3.7
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -2
Query: 867 GGGGGGGXXXXXP---PPPPP 814
GGGGGGG P PPPPP
Sbjct: 25 GGGGGGGCAPAAPACAPPPPP 45
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -1
Query: 868 GGGGGGGGXXXXXP---PPPP 815
GGGGGGGG P PPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPP 44
Score = 27.5 bits (58), Expect(2) = 3.7
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
Frame = -2
Query: 891 FFFXFFXXGGGGGG---GXXXXXPPPPP 817
F F GGGGGG PPPPP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPP 45
Score = 21.0 bits (42), Expect(2) = 3.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2
Query: 831 PPPPPP 814
PPPPPP
Sbjct: 55 PPPPPP 60
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 29.9 bits (64), Expect = 3.7
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPP 868
GGG G PPPPPPP
Sbjct: 23 GGGKGRPPPARPPPPPPP 40
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 24.2 bits (50), Expect(2) = 4.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 868 GGGGGGGGXXXXXP 827
GGGGGGGG P
Sbjct: 840 GGGGGGGGGSYHQP 853
Score = 23.8 bits (49), Expect(2) = 4.1
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 877 FXXGGGGGGGG 845
+ GGGGGGGG
Sbjct: 835 YGGGGGGGGGG 845
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 877 FXXGGGGGGGGXXXXXPPPPP 815
F GGGGGGGG PP P
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 877 FXXGGGGGGGGXXXXXPPPPP 815
F GGGGGGGG PP P
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 877 FXXGGGGGGGGXXXXXPPPPP 815
F GGGGGGGG PP P
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 29.5 bits (63), Expect = 4.8
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -1
Query: 877 FXXGGGGGGGGXXXXXPPPPP 815
F GGGGGGGG PP P
Sbjct: 335 FPGGGGGGGGGLDPFTFPPTP 355
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 803 FXXXGGGGGGXXXXXPPPPP 862
F GGGGG PPPPP
Sbjct: 17 FLFPSGGGGGCGCAPPPPPP 36
Score = 29.1 bits (62), Expect = 6.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPP 817
F GGGGG PPPPP
Sbjct: 17 FLFPSGGGGGCGCAPPPPPP 36
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPPP 814
F GGGGG G PPPPPP
Sbjct: 19 FPSGGGGGCGCA---PPPPPP 36
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 821 GGGGXXXXXPPPPPP 865
GGGG PPPPPP
Sbjct: 22 GGGGGCGCAPPPPPP 36
>AC006636-3|AAF39799.1| 139|Caenorhabditis elegans Ground-like (grd
related) protein27 protein.
Length = 139
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 867 GGGGGGGXXXXXPPPPP 817
G GGGGG PPPPP
Sbjct: 23 GMGGGGGCGCGAPPPPP 39
Score = 29.5 bits (63), Expect = 4.8
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 865 GGGGGGGXXXXXPPPPP 815
G GGGGG PPPPP
Sbjct: 23 GMGGGGGCGCGAPPPPP 39
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +2
Query: 815 GGGGGGXXXXXPPPPPPPXXKXXKKKK 895
G GGGG PPPPP +KK+
Sbjct: 23 GMGGGGGCGCGAPPPPPACGCGGRKKR 49
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1
Query: 877 FXXGGGGGGGG 845
+ GGGGGGGG
Sbjct: 9 YASGGGGGGGG 19
Score = 23.8 bits (49), Expect(2) = 6.0
Identities = 13/28 (46%), Positives = 13/28 (46%), Gaps = 10/28 (35%)
Frame = -1
Query: 868 GGGGGG----------GGXXXXXPPPPP 815
GGGGGG GG PPPPP
Sbjct: 15 GGGGGGGGGGGEAGYSGGAGVEAPPPPP 42
>Z81592-8|CAB04730.1| 365|Caenorhabditis elegans Hypothetical
protein T16G1.8 protein.
Length = 365
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 797 FFFXXXGGGGGGXXXXXPPPPPPP 868
F F G GGGG P PPP P
Sbjct: 16 FQFMFGGSGGGGCGCPCPVPPPVP 39
Score = 28.7 bits (61), Expect = 8.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 876 FXXGGGGGGGXXXXXPPPPP 817
F GG GGGG P PPP
Sbjct: 18 FMFGGSGGGGCGCPCPVPPP 37
>Z77665-7|CAI46591.1| 360|Caenorhabditis elegans Hypothetical
protein K02E11.10 protein.
Length = 360
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 885 FXFFXXGGGGGGGXXXXXPPPPP 817
F F GGGGGGG P P P
Sbjct: 17 FLFGLLGGGGGGGACCGAPAPAP 39
>U53148-3|AAB37077.1| 282|Caenorhabditis elegans Ground-like (grd
related) protein10 protein.
Length = 282
Score = 29.1 bits (62), Expect = 6.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 797 FFFXXXGGGGGGXXXXXPPPPPPP 868
FFF GGGG P PPPP
Sbjct: 22 FFFGAAGGGGACGCAPRPACPPPP 45
>Z69903-1|CAA93772.1| 137|Caenorhabditis elegans Hypothetical
protein F46F2.3 protein.
Length = 137
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 858 GGGGXXXXXPPPPPP 814
GGGG PPPPPP
Sbjct: 108 GGGGAYAQAPPPPPP 122
Score = 28.7 bits (61), Expect = 8.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +2
Query: 821 GGGGXXXXXPPPPPP 865
GGGG PPPPPP
Sbjct: 108 GGGGAYAQAPPPPPP 122
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.7 bits (61), Expect = 8.5
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +2
Query: 815 GGGGGGXXXXX--PPPPPPP 868
GGGGG PPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPP 69
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.7 bits (61), Expect = 8.5
Identities = 12/20 (60%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +2
Query: 815 GGGGGGXXXXX--PPPPPPP 868
GGGGG PPPPPPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPP 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,362,852
Number of Sequences: 27780
Number of extensions: 197485
Number of successful extensions: 5803
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3363
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3234681980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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