Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_F07
(789 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 30 0.028
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 30 0.028
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 29 0.037
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 29 0.037
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.049
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 29 0.065
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 29 0.065
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 29 0.065
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 28 0.086
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.15
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.15
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.15
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.20
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.35
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.80
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.80
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.80
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.80
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 0.80
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 5.7
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 22 5.7
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 7.5
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 123 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 287
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 288 MNWIDKRLSWNA 323
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 129 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 296
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 297 IDKRLSWNAG 326
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.9 bits (64), Expect = 0.028
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 352 VSSERLWRPDVVLLNXXXXTAGDYAL----RARVSNNGSVSWIKRLDISTPISMXXDNXX 519
V S+ +WRPD+VL N G+Y + +A V +G V W + S+ +
Sbjct: 105 VPSDHIWRPDIVLYN---NADGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 520 NDMXTC 537
D+ TC
Sbjct: 162 YDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 29.9 bits (64), Expect = 0.028
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLNXXXXT-AGDYALRARVSNNGSVSW 465
V S+ +WRPD+VL N A +A + + G V W
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 29.5 bits (63), Expect = 0.037
Identities = 17/62 (27%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = +1
Query: 361 ERLWRPDVVLLNXXXXTAGDYAL---RARVSNNGSVSWIKRLDISTPISMXXDNXXNDMX 531
ER+WRPD N + R+S +G + + RL I M N D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 532 TC 537
+C
Sbjct: 175 SC 176
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 29.5 bits (63), Expect = 0.037
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLNXXXXT-AGDYALRARVSNNGSVSW 465
V S+ +WRPD+VL N A +A ++ G V W
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 139
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.049
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 150 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 308
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 309 LSWNAGGMGLQHL 347
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 28.7 bits (61), Expect = 0.065
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 361 ERLWRPDVVLLNXXXXTAGDYALRAR----VSNNGSVSWIKRLDISTPISMXXDNXXNDM 528
+++W+PD+VL N G+Y +R + + NG V W+ + ++ D
Sbjct: 106 DKVWKPDIVLFN---NADGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 529 XTC 537
TC
Sbjct: 163 QTC 165
Score = 23.8 bits (49), Expect = 1.9
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 201 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 347
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 28.7 bits (61), Expect = 0.065
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
+ RLW+PDV++ N G Y V NNG+ ++
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYV 139
Score = 21.8 bits (44), Expect = 7.5
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 102 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 266
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 267 RILADLQMNWIDKRLSWNAGGMG 335
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 28.7 bits (61), Expect = 0.065
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 334 GCSTWLVSSERLWRPDVVLLNXXXXTAGDYAL----RARVSNNGSVSW 465
G V SE +W PD+VL N G+Y + +A + G VSW
Sbjct: 104 GVEMLYVPSENIWLPDIVLYN---NADGNYEVTLMTKATLKYTGDVSW 148
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 28.3 bits (60), Expect = 0.086
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 328 EWGCSTWL-VSSERLWRPDVVLLNXXXXTAGDYAL-RARVSNNGSVSW 465
E+G T L V SE +W PD+VL N G + +A + G V W
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLW 135
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.11
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +1
Query: 334 GCSTWLVSSERLWRPDVVLLNXXXXTAGDYAL----RARVSNNGSVSW 465
G T V SE +W PD+VL N G+Y + +A + + G V W
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYN---NADGNYEVTIMTKAILHHTGKVVW 135
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 150 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 314
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 315 WNAGGMG 335
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.5 bits (58), Expect = 0.15
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V++NGS ++
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 150 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 314
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 315 WNAGGMG 335
WN G
Sbjct: 118 WNESEYG 124
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.15
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 352 VSSERLWRPDVVLLNXXXXTAGDYALRAR--VSNNGSVSWI 468
V R+WRPD +L N + VS+ G V W+
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.20
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V++NGS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 240 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 335
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.35
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 150 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 308
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 309 LSWNAGGMGLQHL 347
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.80
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 240 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 335
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.80
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 240 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 335
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.80
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 240 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 335
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.80
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 240 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 335
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.0 bits (52), Expect = 0.80
Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +1
Query: 352 VSSERLWRPDVVLLN-XXXXTAGDYALRARVSNNGSVSWI 468
++ +LW+PD+++ N G Y V+++GS ++
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 24.2 bits (50), Expect = 1.4
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 240 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 335
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.4
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 129 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 296
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 297 IDKRLSW 317
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 5.7
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 129 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 296
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 297 IDKRLSW 317
D RL++
Sbjct: 68 TDPRLAF 74
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 115 RQNAKTQHHCPS*STRSSQRTIES 186
++ +K HHC + + +Q IES
Sbjct: 59 KEKSKNNHHCNQDTEKLNQLEIES 82
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 7.5
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 183 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 359
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 360 ---GTLV 371
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,848
Number of Sequences: 438
Number of extensions: 3503
Number of successful extensions: 45
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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