Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_E22
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 33 1.0
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 33 1.0
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 33 1.0
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 33 1.0
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 32 2.4
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 32 2.4
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 32 2.4
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 32 2.4
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 32 2.4
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 31 5.6
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 31 5.6
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 31 5.6
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 31 5.6
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 31 5.6
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 31 5.6
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 31 5.6
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 30 7.4
D87742-1|BAA13448.1| 1193|Homo sapiens KIAA0268 protein. 30 7.4
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 30 7.4
BC047116-1|AAH47116.2| 467|Homo sapiens MIA3 protein protein. 30 7.4
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 30 7.4
AL592148-11|CAI40473.1| 785|Homo sapiens C219-reactive peptide ... 30 7.4
AL592148-7|CAI40469.1| 1907|Homo sapiens C219-reactive peptide (... 30 7.4
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 30 7.4
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 30 7.4
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 30 7.4
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 30 7.4
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 33.1 bits (72), Expect = 1.0
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPPXXGXXGN--PPPLXXPPFXFXXXPPXGFFXG 552
G+ P LG PG PP G PPPL PP PP F G
Sbjct: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 281
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 33.1 bits (72), Expect = 1.0
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPPXXGXXGN--PPPLXXPPFXFXXXPPXGFFXG 552
G+ P LG PG PP G PPPL PP PP F G
Sbjct: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 281
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 33.1 bits (72), Expect = 1.0
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPPXXGXXGN--PPPLXXPPFXFXXXPPXGFFXG 552
G+ P LG PG PP G PPPL PP PP F G
Sbjct: 270 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 318
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 33.1 bits (72), Expect = 1.0
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 2/49 (4%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPPXXGXXGN--PPPLXXPPFXFXXXPPXGFFXG 552
G+ P LG PG PP G PPPL PP PP F G
Sbjct: 233 GQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPG 281
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 376 TPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPP 510
TP GG PP G G PP G G P P PP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 376 TPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPP 510
TP GG PP G G PP G G P P PP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 376 TPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPP 510
TP GG PP G G PP G G P P PP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 376 TPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPP 510
TP GG PP G G PP G G P P PP
Sbjct: 367 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 411
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 31.9 bits (69), Expect = 2.4
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 376 TPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPP 510
TP GG PP G G PP G G P P PP
Sbjct: 355 TPRGPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPP 399
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 698 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 745
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 92 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 139
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 698 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 745
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 708 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 755
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 92 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 139
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 687 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 734
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 30.7 bits (66), Expect = 5.6
Identities = 21/50 (42%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +1
Query: 403 PG-GGKXXPPXNL-GXPGVFSPPXX-GXXGNPPPLXXPPFXFXXXPPXGF 543
PG G PP L G PG+ PP G G PPP P PP GF
Sbjct: 735 PGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPPP--PPGMGMPPPPPFGF 782
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 1282 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 1314
>D87742-1|BAA13448.1| 1193|Homo sapiens KIAA0268 protein.
Length = 1193
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +1
Query: 358 PKXXXKTPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPPFXFXXXPPX 537
PK P P GG PP G P P G G P PL PPF PP
Sbjct: 1045 PKGPPPFPGVPLMSTPMGGPVPPPIRYGPP----PQLCGPFG-PRPL-PPPFGPGMRPPL 1098
Query: 538 G 540
G
Sbjct: 1099 G 1099
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 1166 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 1198
>BC047116-1|AAH47116.2| 467|Homo sapiens MIA3 protein protein.
Length = 467
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +1
Query: 358 PKXXXKTPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPPFXFXXXPPX 537
PK P P GG PP G P P G G P PL PPF PP
Sbjct: 319 PKGPPPFPGVPLMSTPMGGPVPPPIRYGPP----PQLCGPFG-PRPL-PPPFGPGMRPPL 372
Query: 538 G 540
G
Sbjct: 373 G 373
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 1282 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 1314
>AL592148-11|CAI40473.1| 785|Homo sapiens C219-reactive peptide
(FLJ39207) protein.
Length = 785
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +1
Query: 358 PKXXXKTPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPPFXFXXXPPX 537
PK P P GG PP G P P G G P PL PPF PP
Sbjct: 637 PKGPPPFPGVPLMSTPMGGPVPPPIRYGPP----PQLCGPFG-PRPL-PPPFGPGMRPPL 690
Query: 538 G 540
G
Sbjct: 691 G 691
>AL592148-7|CAI40469.1| 1907|Homo sapiens C219-reactive peptide
(FLJ39207) protein.
Length = 1907
Score = 30.3 bits (65), Expect = 7.4
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = +1
Query: 358 PKXXXKTPXXXXXXNPGGGKXXPPXNLGXPGVFSPPXXGXXGNPPPLXXPPFXFXXXPPX 537
PK P P GG PP G P P G G P PL PPF PP
Sbjct: 1759 PKGPPPFPGVPLMSTPMGGPVPPPIRYGPP----PQLCGPFG-PRPL-PPPFGPGMRPPL 1812
Query: 538 G 540
G
Sbjct: 1813 G 1813
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 1243 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 1275
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 1294 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 1326
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 1282 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 1314
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 30.3 bits (65), Expect = 7.4
Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +1
Query: 412 GKXXPPXNLGXPGVFSPP-XXGXXGNPPPLXXP 507
G+ PP G PG PP G GNP P+ P
Sbjct: 493 GEAGPPGAAGPPGAKGPPGDDGPKGNPGPVGFP 525
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,168,546
Number of Sequences: 237096
Number of extensions: 1289358
Number of successful extensions: 4447
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3952
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -