Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_E06
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 50 3e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 48 1e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 7e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 45 7e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 9e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 41 2e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 32 0.006
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.010
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 26 0.37
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.86
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 1.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 1.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 1.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 1.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 8.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 50.0 bits (114), Expect = 3e-08
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Frame = +2
Query: 62 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 220
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 221 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAXATTAGDYAL---- 385
+ L+ W D + W+ E+G T L V SE +W PD+VL N G+Y +
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYN---NADGEYGVTTMT 123
Query: 386 RARVSNNGSVSW 421
+A + G V W
Sbjct: 124 KAILHYTGKVLW 135
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3
Query: 471 WPNDMQTCTFKFGS 512
+P D QTC KFGS
Sbjct: 152 FPFDQQTCFMKFGS 165
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 48.0 bits (109), Expect = 1e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +2
Query: 80 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 238
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 239 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGS 412
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 413 VSW 421
V W
Sbjct: 137 VEW 139
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 456 MQLDNWPNDMQTCTFKFGS 512
+ ++ +P D QTC KFGS
Sbjct: 151 IDVEYFPFDEQTCVMKFGS 169
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 47.6 bits (108), Expect = 1e-07
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 9/133 (6%)
Frame = +2
Query: 50 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRE 208
++C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 209 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLL-NAXATTAGDYA 382
T + ++ W D +L WN ++G T V SE +W PD+VL NA
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIM 122
Query: 383 LRARVSNNGSVSW 421
+A + + G V W
Sbjct: 123 TKAILHHTGKVVW 135
Score = 23.8 bits (49), Expect = 2.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 456 MQLDNWPNDMQTCTFKFGS 512
+ ++ +P D QTC KFGS
Sbjct: 147 IDVEYFPFDEQTCFMKFGS 165
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.8 bits (106), Expect = 2e-07
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 271
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSVSW 421
WN E+G L V SE +W PD+VL NA +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSW 148
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 456 MQLDNWPNDMQTCTFKFGSRMHXSDXMD 539
+ ++ +P D Q+C KFGS + +D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 3e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSVSW 421
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 24.6 bits (51), Expect = 1.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 456 MQLDNWPNDMQTCTFKFGS 512
+ ++ +P D QTC KFGS
Sbjct: 155 IDVEYFPFDEQTCVLKFGS 173
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 4e-07
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 271
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 272 WNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGS 412
WN E+ G ++ +LW+PD+++ N A G Y V++NGS
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 46.0 bits (104), Expect = 4e-07
Identities = 28/109 (25%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 271
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 272 WNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTAGDYALRARVSNNGS 412
WN E+ G ++ +LW+PD+++ N A G Y V++NGS
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 186 FPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.2 bits (102), Expect = 7e-07
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGS 412
G Y V++NGS
Sbjct: 85 GTYQTSVVVTHNGS 98
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 45.2 bits (102), Expect = 7e-07
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 80 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 244
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 245 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 346
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSD 530
WP D+ CT S H S+
Sbjct: 166 WPYDILNCTIHIASWSHGSN 185
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGS 412
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGS 412
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGS 412
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGS 412
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.2 bits (50), Expect = 1.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI 548
+P D Q C KFGS + + +D V+
Sbjct: 118 FPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = +2
Query: 197 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AXATTA 370
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 371 GDYALRARVSNNGS 412
G Y V+++GS
Sbjct: 85 GTYQTSVVVTHDGS 98
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 456 MQLDNWPNDMQTCTFKFGSRMHXSDXMDFVI 548
M + +P D Q C KFGS + + +D V+
Sbjct: 113 MDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 3e-06
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Frame = +2
Query: 107 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 271
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 272 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAXATTAGDYALRARVSNNGSVSW 421
W E+G L V S+ +WRPD+VL NA +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNYEVTLMTKATVYYSGLVVW 143
Score = 25.0 bits (52), Expect = 0.86
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +3
Query: 453 SMQLDNWPNDMQTCTFKFGS 512
S+ ++ +P D+QTC K GS
Sbjct: 154 SIDVEFFPYDVQTCVLKLGS 173
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.2 bits (97), Expect = 3e-06
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 7/132 (5%)
Frame = +2
Query: 38 YQFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 202
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 203 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN-AXATTAGD 376
E + L++ W D + WN ++G L + RLW+PDV++ N A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 377 YALRARVSNNGS 412
Y V NNG+
Sbjct: 124 YPTNVVVKNNGT 135
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 253
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 254 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 352
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 30.3 bits (65), Expect = 0.023
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +3
Query: 429 RLDISTPISMQLDNWPNDMQTCTFKFGS 512
RL I M L+N+P D Q C +FGS
Sbjct: 123 RLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.5 bits (93), Expect = 9e-06
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = +2
Query: 158 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 331
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 332 PDVVLL-NAXATTAGDYALRARVSNNGSVSW 421
PD+VL NA Y + NG V W
Sbjct: 111 PDIVLFNNADGNYEVRYKSNVLIYPNGDVLW 141
Score = 28.7 bits (61), Expect = 0.070
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Frame = +3
Query: 471 WPNDMQTCTFKFGSRMHXSDXMDFVI--DKXXYXM---FESGAWDVTDL 602
+P D QTC KFGS D + + +K + ++SG WD+ ++
Sbjct: 158 FPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Frame = +2
Query: 161 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 337
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 338 VVLLNAXATTAGDYALRAR--VSNNGSVSW 421
+L N + VS+ G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 13/124 (10%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 254 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------XATTAGDYALRARVSNN 406
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 407 GSVS 418
GS++
Sbjct: 124 GSIT 127
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.006
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = +2
Query: 95 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 259
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 260 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 352
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 26.6 bits (56), Expect = 0.28
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +3
Query: 429 RLDISTPISMQLDNWPNDMQTCTFKFGS 512
RL I M+L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 32.3 bits (70), Expect = 0.006
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +3
Query: 468 NWPNDMQTCTFKFGSRMHXSDXMDFVIDKXXYXM 569
+WP D C FGS +H + ++ +DK + M
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.010
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Frame = +2
Query: 86 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 253
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 254 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------XATTAGDYALRARVSNN 406
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 407 GSVS 418
GS++
Sbjct: 124 GSIT 127
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.2 bits (55), Expect = 0.37
Identities = 9/41 (21%), Positives = 22/41 (53%)
Frame = +3
Query: 423 IKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDXMDFV 545
+ +L + +M+ +++P+D Q C+ S H + + F+
Sbjct: 123 MSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.86
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = +3
Query: 429 RLDISTPISMQLDNWPNDMQTCTFKFGSRMHXSDXMDFVID 551
+L + +M +P+D Q C + S H +D M F D
Sbjct: 156 KLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 24.6 bits (51), Expect = 1.1
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRDIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLRSRSRSFQ 225
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.5
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 1/102 (0%)
Frame = -2
Query: 542 EIHXVTXVHPRTELERASLHVVGPI-V*LHRNWSANVQALYARRRSRY*IHGRGERSPRR 366
+IH V P T + ++ P V L R + ++ R + ++ E + R
Sbjct: 131 DIHRVLPGKPTTTSDELKRGIINPEDVMLKRRTGEGSKPIFEREEIKNILNKTNEITEHR 190
Query: 365 WLXPRLAVPRQASTSVPRTPAKCCSPIPLRSNSVVCRSNSFE 240
+ LAV + S + +T C + SNS+ RS SF+
Sbjct: 191 TV---LAVNIEKSENETKT----CKKYAISSNSLGSRSRSFQ 225
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 304 PSAAAPFPCVPTQS 263
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 8.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 103 GQ*CCVFAFCRTSYSTSEEKLVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,450
Number of Sequences: 438
Number of extensions: 4311
Number of successful extensions: 81
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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