Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_D22
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0479 + 3606663-3607448 36 0.033
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 33 0.18
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.31
09_01_0165 - 2436769-2437442,2438159-2438224,2438318-2438415,243... 32 0.54
09_02_0495 + 9880714-9881196 31 0.71
05_01_0142 - 940421-940701,941262-941574 31 0.71
05_03_0665 - 16774043-16774522 30 1.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 2.2
07_03_1136 + 24218601-24218734,24218769-24219906 30 2.2
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 30 2.2
06_01_0474 - 3362734-3362827,3363179-3363366,3363458-3363700,336... 29 2.9
11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794... 29 3.8
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.0
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 28 6.6
11_01_0385 + 2915532-2916482 28 6.6
04_03_0801 - 19828175-19828770,19828913-19828994 28 6.6
06_03_0729 + 23927656-23927661,23927774-23927923,23928316-239285... 28 8.7
03_02_0178 + 6195402-6199158,6199438-6200003 28 8.7
01_07_0082 - 40965947-40967023 28 8.7
>07_01_0479 + 3606663-3607448
Length = 261
Score = 35.9 bits (79), Expect = 0.033
Identities = 24/71 (33%), Positives = 24/71 (33%)
Frame = +1
Query: 349 PFFFGKNXPPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPPXXF 528
PF PP G PPPPP G P G G PPP G PP F
Sbjct: 186 PFQRPPGVPPAFPGGPPPPPGPFMRGPPPMG---PPQVRPGMPGGPPP-GMRPGMPPPPF 241
Query: 529 FXXXXXPPXXP 561
PP P
Sbjct: 242 RPGMPPPPPGP 252
Score = 35.1 bits (77), Expect = 0.058
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = +3
Query: 372 PPXXGGXPPPPPXXKKXXFXXXXGGXXXXXXXGXGGXXPPPXFXXGXPPPXFFXXXXXPX 551
PP G PPPPP G GG PPP G PPP F P
Sbjct: 194 PPAFPGGPPPPPGPFMRG--PPPMGPPQVRPGMPGG--PPPGMRPGMPPPPFRPGMPPPP 249
Query: 552 PXP 560
P P
Sbjct: 250 PGP 252
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 33.5 bits (73), Expect = 0.18
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPP 519
PP G PP PP G G P G GG P P G PP
Sbjct: 351 PPSYGAPPPNPPY--SGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPP 397
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = -2
Query: 518 GGXPXXKXXGGGXPPXPXXXXXGXPPPPXXKXXFFXXGGGGGXPPXXGG 372
G P G G P P G PPP + GGGGG GG
Sbjct: 372 GSLPPSYDGGYGGRPMPGGGGPGAPPP------YHGGGGGGGGGGGGGG 414
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.31
Identities = 25/75 (33%), Positives = 26/75 (34%), Gaps = 8/75 (10%)
Frame = +1
Query: 361 GKNXPPXXGGX-----PPPPPXXKKXXXXXGGGGXPXXXFXGXGGXP---PPXXFXXGXP 516
G PP GG PP PP + GG P G GG P PP F G P
Sbjct: 1120 GVPPPPPIGGLGGHQAPPAPPLPEGI-----GGVPPPPPVGGLGGPPAPPPPAGFRGGTP 1174
Query: 517 PXXFFXXXXXPPXXP 561
P PP P
Sbjct: 1175 PPNAHGGVAPPPPPP 1189
Score = 32.3 bits (70), Expect = 0.41
Identities = 19/53 (35%), Positives = 19/53 (35%), Gaps = 4/53 (7%)
Frame = -2
Query: 518 GGXPXXKXXGGGXPPXPXXXXXGX----PPPPXXKXXFFXXGGGGGXPPXXGG 372
GG P GG PP P G P PP G GG PP GG
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223
Score = 28.7 bits (61), Expect = 5.0
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +1
Query: 355 FFGKNXPPXX-GGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPPXXFF 531
F G PP GG PPPP + G GG P G P P G PP
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPR---GHGGVGGPPTP--PGAPAPPMPPGVPGGPPPPPGG 1223
Query: 532 XXXXXPP 552
PP
Sbjct: 1224 RGLPAPP 1230
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +1
Query: 385 GGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPP 519
GG PP PP G P G PPP G PP
Sbjct: 1079 GGIPPLPPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPP 1123
Score = 27.9 bits (59), Expect = 8.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -2
Query: 518 GGXPXXKXXGGGXPPXPXXXXXGXPPPPXXKXXFFXXGGGG 396
GG P G PP P G PPPP + GG G
Sbjct: 1196 GGPPTPP--GAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRG 1234
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGG 447
PP G PPPPP + GG G
Sbjct: 1210 PPGVPGGPPPPPGGRGLPAPPGGRG 1234
>09_01_0165 -
2436769-2437442,2438159-2438224,2438318-2438415,
2439856-2440214
Length = 398
Score = 31.9 bits (69), Expect = 0.54
Identities = 22/59 (37%), Positives = 25/59 (42%)
Frame = +1
Query: 343 RAPFFFGKNXPPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPP 519
RAP + G N G PPPPP + GG P GG PPP + G PP
Sbjct: 299 RAPGYQGGNQE--YRGPPPPPPSAYQGNNPGYQGGGPGY----HGGNPPP--YQAGNPP 349
>09_02_0495 + 9880714-9881196
Length = 160
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 5/54 (9%)
Frame = +1
Query: 373 PPXXGGX----PPPPPXXKKXXXXXGGG-GXPXXXFXGXGGXPPPXXFXXGXPP 519
PP GG PPPPP GGG G F G PPP P
Sbjct: 40 PPIAGGAVNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPPPPGVMPGAFAP 93
>05_01_0142 - 940421-940701,941262-941574
Length = 197
Score = 31.5 bits (68), Expect = 0.71
Identities = 18/57 (31%), Positives = 21/57 (36%), Gaps = 5/57 (8%)
Frame = +1
Query: 373 PPXXGGXPPPP---PXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXF--XXGXPPXXF 528
PP G PPPP P G P + GG PPP + G PP +
Sbjct: 41 PPPPGAYPPPPGAYPPPPGAYPPPPGAYPPQHGYPQPGGYPPPGGYPQHGGYPPAGY 97
>05_03_0665 - 16774043-16774522
Length = 159
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 479 PPXPXXXXXGXPPPPXXKXXFFXXGGGGG 393
PP P PPPP + + GG GG
Sbjct: 73 PPLPPPPRLALPPPPGRRDGYLGGGGAGG 101
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/68 (29%), Positives = 22/68 (32%)
Frame = +1
Query: 358 FGKNXPPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPPXXFFXX 537
+ + PP GG PP PP G P G PPP G PP
Sbjct: 7 YAPHPPPPQGGFPPQPPPMNPY-------GPPPPQQPAYGHMPPP----QGAPPPFLAPP 55
Query: 538 XXXPPXXP 561
PP P
Sbjct: 56 PPPPPGPP 63
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/50 (38%), Positives = 19/50 (38%)
Frame = -3
Query: 520 GGGXPXKKXGGGXXPPXPXXXFXXXPPXXXXKXXFFXXGGGGGXPPXXGG 371
GGG P GGG PP PP GGGG PP GG
Sbjct: 94 GGGAPGPLGGGGARPPGGGG--GGGPPSLPPG----AGGGGGARPPAPGG 137
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 397 PPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPP 519
P P K GGGG P G GG PP G PP
Sbjct: 80 PRPLPIKLLGLPPGGGGAPGPL--GGGGARPPGGGGGGGPP 118
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGG 480
PP GG P P GGGG P G GG
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGG 126
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXG--XGGXPPP 492
PP G PPPPP GGGG P G PPP
Sbjct: 363 PPGPGPGPPPPPGAA----GRGGGGPPPPALPGGPRARGPPP 400
Score = 27.9 bits (59), Expect = 8.7
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = -2
Query: 515 GXPXXKXXGGGXPPXPXXXXXGXPPPPXXKXXFFXXGGGGGXPPXXGG 372
G P P P G PPPP GGGG PP G
Sbjct: 348 GPPPPPPPAAPAAPRPPGPGPGPPPPPGAA----GRGGGGPPPPALPG 391
>06_01_0474 -
3362734-3362827,3363179-3363366,3363458-3363700,
3363820-3364098,3364189-3364386,3364475-3365110,
3365209-3365463,3365579-3365685,3365770-3369566,
3369677-3370166,3370918-3371308,3371481-3371573,
3371687-3371810,3372544-3372791
Length = 2380
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 361 GKNXPPXXGGXPPPPPXXKKXXXXXGGGGXP 453
G PP G PPPPP GGG P
Sbjct: 2 GAAPPPPGTGAPPPPPPAAVGPPGGVGGGKP 32
>11_02_0065 -
7938007-7938393,7939292-7939435,7940597-7940665,
7940762-7940809,7941488-7941584,7941688-7941767,
7941841-7941912,7942256-7942350,7943903-7943984,
7945176-7945209,7945255-7945262,7945657-7946058
Length = 505
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = -2
Query: 479 PPXPXXXXXGXPPPPXXKXXFFXXGGGGG 393
PP P PPPP ++ GGGG
Sbjct: 68 PPPPAAFFAAVPPPPPPPFEYYPAVGGGG 96
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/65 (29%), Positives = 19/65 (29%), Gaps = 2/65 (3%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXG--GXPPPXXFXXGXPPXXFFXXXXX 546
PP PPPPP G P G PPP G PP
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASR 388
Query: 547 PPXXP 561
PP P
Sbjct: 389 PPAAP 393
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/62 (27%), Positives = 17/62 (27%)
Frame = +1
Query: 376 PXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPPXXFFXXXXXPPX 555
P PPPPP G P G PPP PP PP
Sbjct: 321 PAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
Query: 556 XP 561
P
Sbjct: 381 PP 382
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 443 PPPXXKXXFFXXGGGGGXPPXXGG 372
PPP + GGGGG P GG
Sbjct: 265 PPPLLPPPCYSGGGGGGYTPYCGG 288
>11_01_0385 + 2915532-2916482
Length = 316
Score = 28.3 bits (60), Expect = 6.6
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGGXPPPXXFXXGXPPXXFFXXXXXPP 552
PP P PP + GGG P G PP F P PP
Sbjct: 143 PPPESYTPDAPPAPEAASPHHGGGENPAWPRPGNNQWPPLPPFNQPPTPEWPHPGNKWPP 202
Query: 553 XXP 561
P
Sbjct: 203 LPP 205
>04_03_0801 - 19828175-19828770,19828913-19828994
Length = 225
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 9/57 (15%)
Frame = +1
Query: 376 PXXGGXPPPPPXXKKXXXXXGGG--GXPXXXFXGXGG-------XPPPXXFXXGXPP 519
P GG PPPP K GGG G G GG PPP + PP
Sbjct: 149 PCCGGCVPPPPRCKCGVDGCGGGCSGGHGGECGGGGGGCKKPCCSPPPCPWQPVCPP 205
>06_03_0729 +
23927656-23927661,23927774-23927923,23928316-23928567,
23929072-23929209,23931213-23932730
Length = 687
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/36 (33%), Positives = 14/36 (38%)
Frame = +1
Query: 373 PPXXGGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGG 480
PP PPP P + GGGG + G G
Sbjct: 211 PPPSPPPPPPSPAAHRRCSSSGGGGGDDDGYGGGDG 246
>03_02_0178 + 6195402-6199158,6199438-6200003
Length = 1440
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +1
Query: 385 GGXPPPPPXXKKXXXXXGGGGXPXXXFXGXGG 480
G PPPPP ++ G G F G GG
Sbjct: 22 GPPPPPPPPRRRPGDYDGDGFDRRKGFGGGGG 53
>01_07_0082 - 40965947-40967023
Length = 358
Score = 27.9 bits (59), Expect = 8.7
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = -2
Query: 491 GGGXP--PXPXXXXXGXPPPPXXKXXFFXXGGGGGXPPXXG 375
G G P P P G PPPP GGG G PP G
Sbjct: 261 GYGYPAQPPPPQAGYGYPPPPPQA----GYGGGYGYPPQAG 297
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,265,338
Number of Sequences: 37544
Number of extensions: 444841
Number of successful extensions: 2822
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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