Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_D09
(729 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.039
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.039
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.039
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 35 0.052
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.052
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.091
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.091
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.091
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.16
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.16
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 33 0.16
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 33 0.16
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 32 0.37
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.48
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 32 0.48
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 32 0.48
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 31 0.84
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 1.1
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 31 1.1
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 1.1
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 1.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 29 2.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 2.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.6
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 4.5
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.5
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.5
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 5.9
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 5.9
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 5.9
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 5.9
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 5.9
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 7.9
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 7.9
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/79 (32%), Positives = 28/79 (35%)
Frame = +3
Query: 267 PXNXFXTPXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXX 446
P + F P G GG G P P GGP PGG P P G PPP
Sbjct: 393 PPSAFGAPQGPGGPGGYG--PPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTG 450
Query: 447 KRGGXXPPPXFSXXXXGPP 503
PPP + G P
Sbjct: 451 FPPVGAPPPGAAGAPGGNP 469
Score = 36.3 bits (80), Expect = 0.022
Identities = 22/60 (36%), Positives = 24/60 (40%)
Frame = +3
Query: 327 PKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
P+ GGP + G PPGG P G PP GG PPP GPPP
Sbjct: 400 PQGPGGPGGY-----GPPPPGGPGAPGSYG------PPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 32.7 bits (71), Expect = 0.28
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXP-PPGGXXXPXPXXXXKXPPPPXXKGGG 459
GPPG P GGP + P PG P PPPP G
Sbjct: 385 GPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Query: 460 XXXPPFFXXXXXAPP 504
P F PP
Sbjct: 445 GPPPTGFPPVGAPPP 459
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/61 (36%), Positives = 22/61 (36%)
Frame = -3
Query: 469 GGXXPPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPX 290
G PP G P G G PPGG P GPP G P PPPP
Sbjct: 388 GAFAPPPSAFGAPQGPGGPGGYGPP-PPGGPGAPGSY----GPPQG---GPGGFGPPPPG 439
Query: 289 G 287
G
Sbjct: 440 G 440
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 436 GGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPP 296
GG P G PG PP GPP G P PPP
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGG--PGAYGPPP 448
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 3/82 (3%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPK--PXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGX 461
P G G P+ P GGP G PP P P PP G
Sbjct: 322 PPQGAPQQGFGAPPQGPPQGGPPQ---GSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNF 378
Query: 462 XPPPXFS-XXXXGPPPXXXXXP 524
PPP PPP P
Sbjct: 379 APPPQSGPPGAFAPPPSAFGAP 400
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 380 PPRGGXPPXPPXXXKXXPPPXXKKGGXXXXPXFFXXXXXPPP 505
P GG PP PP PPP GG P F PPP
Sbjct: 78 PGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 34.7 bits (76), Expect = 0.068
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 384 PGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
PGG P P PPP G PPP F PPP
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 402 PXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPPXXXXXP 524
P P G PPP GG PPP PPP P
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
Score = 33.1 bits (72), Expect = 0.21
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +1
Query: 379 PPPGGXXXPXPXXXXKXPPPPXXKGGGXXXPPFFXXXXXAPP 504
P P G P P PPPP GG PP PP
Sbjct: 68 PVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 14/42 (33%)
Frame = +1
Query: 379 PPPGGXXXPXPXXXXKXPPPPXXKGGGXXXPPFFXXXXXAPP 504
PP P P PPPP GG PP PP
Sbjct: 67 PPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = +1
Query: 286 PPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGGXX 465
PPG GG P P F PP G P P PPPP G G
Sbjct: 77 PPGPGGIPPP----------PPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVA 126
Query: 466 XPP 474
P
Sbjct: 127 PQP 129
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +2
Query: 308 PXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKGGXXXXPXFFXX 487
P G G+P G PPR G PP PP PP GG P
Sbjct: 242 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP----TGSPPPPPAGGSPPPPRAGSP 297
Query: 488 XXXPPP 505
PPP
Sbjct: 298 PPPPPP 303
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
P GG P P P G PP P P G PPP KR
Sbjct: 284 PAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 342
Query: 468 PPXFSXXXXGPPP 506
P G PP
Sbjct: 343 SPPTGSPPTGSPP 355
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -1
Query: 408 GXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXGSXXSXLXTQLXKKFPLFSP 229
G PPR G PP G+PP P G PPP G+ + ++ P SP
Sbjct: 286 GGSPPPPRAGSPPPPPPPR-GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 344
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G P GG PP PP G P PPP G
Sbjct: 276 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPP----PXXKKGGX 460
G P G G+P G PPR G PP PP + PP P + GG
Sbjct: 262 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP-PPPPPRGSPPTGSLPPPQAGG- 319
Query: 461 XXXPXFFXXXXXPPP 505
P PPP
Sbjct: 320 -SPPPAGTGSPPPPP 333
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G PP PP PP G P PPP G
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 393 PPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
PP GG PP PP P PPP G
Sbjct: 283 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 318
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 457 PPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPP 293
PPL G G P P G PP PP G P PPP
Sbjct: 247 PPL--AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +2
Query: 308 PXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKGGXXXXPXFFXX 487
P G G+P G PPR G PP PP PP GG P
Sbjct: 263 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP----TGSPPPPPAGGSPPPPRAGSP 318
Query: 488 XXXPPP 505
PPP
Sbjct: 319 PPPPPP 324
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
P GG P P P G PP P P G PPP KR
Sbjct: 305 PAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 363
Query: 468 PPXFSXXXXGPPP 506
P G PP
Sbjct: 364 SPPTGSPPTGSPP 376
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -1
Query: 408 GXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXGSXXSXLXTQLXKKFPLFSP 229
G PPR G PP G+PP P G PPP G+ + ++ P SP
Sbjct: 307 GGSPPPPRAGSPPPPPPPR-GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 365
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G P GG PP PP G P PPP G
Sbjct: 297 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPP----PXXKKGGX 460
G P G G+P G PPR G PP PP + PP P + GG
Sbjct: 283 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP-PPPPPRGSPPTGSLPPPQAGG- 340
Query: 461 XXXPXFFXXXXXPPP 505
P PPP
Sbjct: 341 -SPPPAGTGSPPPPP 354
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G PP PP PP G P PPP G
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 393 PPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
PP GG PP PP P PPP G
Sbjct: 304 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 339
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 457 PPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPP 293
PPL G G P P G PP PP G P PPP
Sbjct: 268 PPL--AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +2
Query: 308 PXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKGGXXXXPXFFXX 487
P G G+P G PPR G PP PP PP GG P
Sbjct: 248 PPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP----TGSPPPPPAGGSPPPPRAGSP 303
Query: 488 XXXPPP 505
PPP
Sbjct: 304 PPPPPP 309
Score = 34.3 bits (75), Expect = 0.091
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
P GG P P P G PP P P G PPP KR
Sbjct: 290 PAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPER 348
Query: 468 PPXFSXXXXGPPP 506
P G PP
Sbjct: 349 SPPTGSPPTGSPP 361
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/60 (31%), Positives = 24/60 (40%)
Frame = -1
Query: 408 GXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXGSXXSXLXTQLXKKFPLFSP 229
G PPR G PP G+PP P G PPP G+ + ++ P SP
Sbjct: 292 GGSPPPPRAGSPPPPPPPR-GSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSP 350
Score = 31.1 bits (67), Expect = 0.84
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G P GG PP PP G P PPP G
Sbjct: 282 PTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
Score = 30.7 bits (66), Expect = 1.1
Identities = 23/75 (30%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPP----PXXKKGGX 460
G P G G+P G PPR G PP PP + PP P + GG
Sbjct: 268 GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP-PPPPPRGSPPTGSLPPPQAGG- 325
Query: 461 XXXPXFFXXXXXPPP 505
P PPP
Sbjct: 326 -SPPPAGTGSPPPPP 339
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G PP PP PP G P PPP G
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -1
Query: 393 PPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
PP GG PP PP P PPP G
Sbjct: 289 PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAG 324
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -3
Query: 457 PPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPP 293
PPL G G P P G PP PP G P PPP
Sbjct: 253 PPL--AGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.1 bits (77), Expect = 0.052
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = -1
Query: 456 PPFXXXGGGXFXXXXGGXGGXPPRGGXXPPXXKKXXGAPP---XVXXXTPXXGXPPPPXG 286
PP GGG GG GG P GG P G PP + P G P P G
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 453 PFXXXGGGXFXXXXGGXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
P GG GG GG P GG P G PP G P P G
Sbjct: 164 PRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 219
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 457 PPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
PP GGG P G G GG P GPP G PPP G
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMG----GPPPGQG 206
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +1
Query: 259 LGXQXTXXGPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPP 438
+G GPPGG G P G GGP G PPG P P
Sbjct: 158 MGGGGDPRGPPGGMGGPPGHG----GMGGPP---GHGGQGGPPGHGGMGGPPPGQGGPGG 210
Query: 439 PXXKGG 456
P GG
Sbjct: 211 PGGPGG 216
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.052
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 3/60 (5%)
Frame = -1
Query: 456 PPFXXXGGGXFXXXXGGXGGXPPRGGXXPPXXKKXXGAPP---XVXXXTPXXGXPPPPXG 286
PP GGG GG GG P GG P G PP + P G P P G
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 453 PFXXXGGGXFXXXXGGXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
P GG GG GG P GG P G PP G P P G
Sbjct: 444 PRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPGG 499
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/57 (33%), Positives = 19/57 (33%)
Frame = -3
Query: 457 PPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
PP GGG P G G GG P GPP G PPP G
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMG----GPPPGQG 486
Score = 27.9 bits (59), Expect = 7.9
Identities = 21/66 (31%), Positives = 22/66 (33%)
Frame = +1
Query: 259 LGXQXTXXGPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPP 438
+G GPPGG G P G GGP G PPG P P
Sbjct: 438 MGGGGDPRGPPGGMGGPPGHG----GMGGPP---GHGGQGGPPGHGGMGGPPPGQGGPGG 490
Query: 439 PXXKGG 456
P GG
Sbjct: 491 PGGPGG 496
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PP--GGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGG 459
PP GG P G GGP G P GG P P PPPP GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 460 XXXPP 474
P
Sbjct: 780 FKGGP 784
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PPGGGGXPXXXGXXXNXXGG--PXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGG 459
PP GG P G G P PPPGG P P PPP KGG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGP 784
Query: 460 XXXPP 474
PP
Sbjct: 785 PPPPP 789
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 402 GGXPPRGGXXPPXXKKXXGAPPXVXXXTP--XXGXPPPP 292
GG PP G PP G PP P G PPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 308 PXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKG 454
P G GG P GG PP PP PP K PPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGG--PXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGX 461
P GG G P P G P PPGG P P PPP +GG
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP------PPPGGFKGGP 784
Query: 462 XPPP 473
PPP
Sbjct: 785 PPPP 788
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXX--GGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGG 456
GPP G P G GG PPPGG P PPPP GG
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGGPPPPPPPPGG 767
Query: 457 GXXXPP 474
PP
Sbjct: 768 CPPPPP 773
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 327 PKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
P P GG PPGG P G PPP PPP GPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPP-GGFKGGPPP 786
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = -3
Query: 505 GGGPXXXXEKXGGGXXPPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXG 326
GG P G PP GG G PP G PP PP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 325 XNPXXXXPPPPXG 287
P PPPP G
Sbjct: 768 C-PPPPPPPPPGG 779
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 318 GXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
G P GGP GG PP P P G K PPP G P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPGMFAP 795
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PP--GGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGG 459
PP GG P G GGP G P GG P P PPPP GG
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 779
Query: 460 XXXPP 474
P
Sbjct: 780 FKGGP 784
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PPGGGGXPXXXGXXXNXXGG--PXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGG 459
PP GG P G G P PPPGG P P PPP KGG
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGP 784
Query: 460 XXXPP 474
PP
Sbjct: 785 PPPPP 789
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 402 GGXPPRGGXXPPXXKKXXGAPPXVXXXTP--XXGXPPPP 292
GG PP G PP G PP P G PPPP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 308 PXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKG 454
P G GG P GG PP PP PP K PPP G
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPG 791
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGG--PXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGX 461
P GG G P P G P PPGG P P PPP +GG
Sbjct: 731 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP------PPPGGFKGGP 784
Query: 462 XPPP 473
PPP
Sbjct: 785 PPPP 788
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXX--GGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGG 456
GPP G P G GG PPPGG P PPPP GG
Sbjct: 712 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGGPPPPPPPPGG 767
Query: 457 GXXXPP 474
PP
Sbjct: 768 CPPPPP 773
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 327 PKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
P P GG PPGG P G PPP PPP GPPP
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPP-GGFKGGPPP 786
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = -3
Query: 505 GGGPXXXXEKXGGGXXPPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXG 326
GG P G PP GG G PP G PP PP G
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 325 XNPXXXXPPPPXG 287
P PPPP G
Sbjct: 768 C-PPPPPPPPPGG 779
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 318 GXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
G P GGP GG PP P P G K PPP G P
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPGMFAP 795
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 34.3 bits (75), Expect = 0.091
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PP--GGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGG 459
PP GG P G GGP G P GG P P PPPP GG
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGG 362
Query: 460 XXXPP 474
P
Sbjct: 363 FKGGP 367
Score = 33.1 bits (72), Expect = 0.21
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 2/65 (3%)
Frame = +1
Query: 286 PPGGGGXPXXXGXXXNXXGG--PXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGG 459
PP GG P G G P PPPGG P P PPP KGG
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP-----PPPGGFKGGP 367
Query: 460 XXXPP 474
PP
Sbjct: 368 PPPPP 372
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -1
Query: 402 GGXPPRGGXXPPXXKKXXGAPPXVXXXTP--XXGXPPPP 292
GG PP G PP G PP P G PPPP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
Score = 32.3 bits (70), Expect = 0.37
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +2
Query: 308 PXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKG 454
P G GG P GG PP PP PP K PPP G
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPG 374
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/64 (34%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGG--PXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGX 461
P GG G P P G P PPGG P P PPP +GG
Sbjct: 314 PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP------PPPGGFKGGP 367
Query: 462 XPPP 473
PPP
Sbjct: 368 PPPP 371
Score = 31.1 bits (67), Expect = 0.84
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXX--GGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGG 456
GPP G P G GG PPPGG P PPPP GG
Sbjct: 295 GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGL----PPISGGPPPPPPPPGG 350
Query: 457 GXXXPP 474
PP
Sbjct: 351 CPPPPP 356
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +3
Query: 327 PKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
P P GG PPGG P G PPP PPP GPPP
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPP-GGFKGGPPP 369
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/73 (31%), Positives = 23/73 (31%)
Frame = -3
Query: 505 GGGPXXXXEKXGGGXXPPLFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXG 326
GG P G PP GG G PP G PP PP G
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGG---LPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 325 XNPXXXXPPPPXG 287
P PPPP G
Sbjct: 351 C-PPPPPPPPPGG 362
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 318 GXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
G P GGP GG PP P P G K PPP G P
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPP---PPPPPPGGFKGGPPPPPPPGMFAP 378
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 8/85 (9%)
Frame = +3
Query: 318 GXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKR------GGXXPPPXF 479
G P+P P PPG P P G PPP R GG PPP
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPG--RTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Query: 480 SXXXXG--PPPXXXXXPXXGXXXXP 548
G PPP P G P
Sbjct: 340 GMRYPGGMPPPPPPRYPSAGPGMYP 364
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 6/59 (10%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGG------PXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPP 441
GPPG GG P GG P G PPP P P PPP
Sbjct: 326 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 384
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.16
Identities = 26/85 (30%), Positives = 27/85 (31%), Gaps = 8/85 (9%)
Frame = +3
Query: 318 GXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKR------GGXXPPPXF 479
G P+P P PPG P P G PPP R GG PPP
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPG--RTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Query: 480 SXXXXG--PPPXXXXXPXXGXXXXP 548
G PPP P G P
Sbjct: 350 GMRYPGGMPPPPPPRYPSAGPGMYP 374
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 6/59 (10%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGG------PXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPP 441
GPPG GG P GG P G PPP P P PPP
Sbjct: 336 GPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPP 394
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXP--PPGGXXXPXPXXXXKXPPPPXXKGG 456
GPPGGG P GGP G PP P PPPP + G
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
Query: 457 GXXXPP 474
PP
Sbjct: 732 YGYPPP 737
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Frame = -3
Query: 472 GGGXXPP-----LFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXX 308
GGG PP GG P G PP PP + GPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGY 734
Query: 307 XPPPPXG 287
PPP G
Sbjct: 735 PPPPQPG 741
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/80 (30%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
P GGG G P P G GG PPG P + PP + P
Sbjct: 673 PPGGG----QGPPPPPQGQQYY-----GGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGP 723
Query: 468 PPXFSXXXXG-PPPXXXXXP 524
PP G PPP P
Sbjct: 724 PPPQQQRGYGYPPPPQPGHP 743
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXP--PPGGXXXPXPXXXXKXPPPPXXKGG 456
GPPGGG P GGP G PP P PPPP + G
Sbjct: 672 GPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRG 731
Query: 457 GXXXPP 474
PP
Sbjct: 732 YGYPPP 737
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Frame = -3
Query: 472 GGGXXPP-----LFXXGGGXXFXXPXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXX 308
GGG PP GG P G PP PP + GPP
Sbjct: 675 GGGQGPPPPPQGQQYYGGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPPQQQRGYGY 734
Query: 307 XPPPPXG 287
PPP G
Sbjct: 735 PPPPQPG 741
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/80 (30%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
P GGG G P P G GG PPG P + PP + P
Sbjct: 673 PPGGG----QGPPPPPQGQQYY-----GGPPPPGQPYGPPGGYPPQQQRPPYQAQPYPGP 723
Query: 468 PPXFSXXXXG-PPPXXXXXP 524
PP G PPP P
Sbjct: 724 PPPQQQRGYGYPPPPQPGHP 743
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 32.3 bits (70), Expect = 0.37
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Frame = -3
Query: 502 GGPXXXXEKXGG---GXXPPLFXXGGGXXFXXPXGX-GXXXPPGGXXPPXXXKXXXGPPX 335
GGP + G G P LF G P G G P PP PP
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPS 208
Query: 334 GXGXNPXXXXPPPPXG 287
G P PP G
Sbjct: 209 GGPTGPFDPSGAPPSG 224
Score = 29.5 bits (63), Expect = 2.6
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 399 GXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXGSXXSXLXTQL 256
G PP GG PP GAPP P PP G L T L
Sbjct: 489 GAPPSGG--PPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLPTDL 534
Score = 29.1 bits (62), Expect = 3.4
Identities = 27/102 (26%), Positives = 28/102 (27%), Gaps = 6/102 (5%)
Frame = -3
Query: 574 PXGPXXXXX-GXXXXPXXGXXXXXGGGPXXXXEKXGG---GXXPPLFXXGGGXXFXXPXG 407
P GP G P GGP + G G P F G P G
Sbjct: 184 PFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPG 243
Query: 406 X--GXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
PP G PP PP G P PP G
Sbjct: 244 PFDPSGAPPSGG-PPGPFNPSGAPPSGGPPGPFDPSGAPPSG 284
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Frame = +3
Query: 267 PXNXFXTPXGGG--GXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXGXXKXXPP 437
P N P GG G P P GGP F G P GG P P G P
Sbjct: 199 PFNPSEAPPSGGPTGPFDPSGAP-PSGGPPGPF-NPSGAPPSGGPPGPFDPSGAPPSGGP 256
Query: 438 PXXKRGGXXPP---PXFSXXXXGPPP 506
P PP P G PP
Sbjct: 257 PGPFNPSGAPPSGGPPGPFDPSGAPP 282
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Frame = +3
Query: 267 PXNXFXTPXGGG--GXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXGXXKXXPP 437
P N P GG G P P GGP F G P GG P P G P
Sbjct: 259 PFNPSGAPPSGGPPGPFDPSGAP-PSGGPPGPF-DPSGAPPSGGPPGPFDPSGAQPSGGP 316
Query: 438 PXXKRGGXXPP---PXFSXXXXGPPP 506
P PP P G PP
Sbjct: 317 PGPFNPSGAPPSGGPPGPFDPSGAPP 342
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Frame = +3
Query: 267 PXNXFXTPXGGG--GXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXGXXKXXPP 437
P N P GG G P P GGP F G P GG P P G P
Sbjct: 349 PFNPSGAPPSGGPPGPFDPSGAP-PSGGPPGPF-DPSGAPPSGGPPGPFDPSGAPPSGGP 406
Query: 438 PXXKRGGXXPP---PXFSXXXXGPPP 506
P PP P G PP
Sbjct: 407 PGPFNPSGAPPSGGPPGPFNPSGAPP 432
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Frame = +3
Query: 267 PXNXFXTPXGGG--GXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXGXXKXXPP 437
P N P GG G P P GGP F G P GG P P G P
Sbjct: 409 PFNPSGAPPSGGPPGPFNPSGAP-PSGGPPGPF-NPSGAPPSGGPPGPFNPSGAPPSGGP 466
Query: 438 PXXKRGGXXPP---PXFSXXXXGPPP 506
P PP P G PP
Sbjct: 467 PGPFNPSGAPPSGGPPGPFDPSGAPP 492
Score = 28.7 bits (61), Expect = 4.5
Identities = 27/86 (31%), Positives = 27/86 (31%), Gaps = 6/86 (6%)
Frame = +3
Query: 267 PXNXFXTPXGGG--GXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXGXXKXXPP 437
P N P GG G P P GGP F G P GG P P G P
Sbjct: 439 PFNPSGAPPSGGPPGPFNPSGAP-PSGGPPGPF-NPSGAPPSGGPPGPFDPSGAPPSGGP 496
Query: 438 PXXKRGGXXPP---PXFSXXXXGPPP 506
P PP P G PP
Sbjct: 497 PGPFNPSGAPPSGGPPGPFDPSGAPP 522
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 4/77 (5%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXGXXKXXPPPXXKRGGXX 464
P GG P GGP F G P GG P P G PP
Sbjct: 147 PSGGPPGPFDPSGAPPSGGPPGLF-DPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEA 205
Query: 465 PP---PXFSXXXXGPPP 506
PP P G PP
Sbjct: 206 PPSGGPTGPFDPSGAPP 222
Score = 28.3 bits (60), Expect = 5.9
Identities = 31/108 (28%), Positives = 31/108 (28%), Gaps = 7/108 (6%)
Frame = +3
Query: 267 PXNXFXTPXGGG--GXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXP-XPXG-XXKXXP 434
P N P GG G P P GGP F G P GG P P G P
Sbjct: 319 PFNPSGAPPSGGPPGPFDPSGAP-PSGGPPGPF-NPSGAPPSGGPPGPFDPSGAPPSGGP 376
Query: 435 PPXXKRGGXXP---PPXFSXXXXGPPPXXXXXPXXGXXXXPXXXXXGP 569
P G P PP PP P P GP
Sbjct: 377 PGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGP 424
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = -3
Query: 502 GGPXXXXEKXGG---GXXPPLFXXGGGXXFXXPXGX--GXXXPPGGXXPPXXXKXXXGPP 338
GGP + G G P F G P G PP G PP PP
Sbjct: 299 GGPPGPFDPSGAQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGG-PPGPFNPSGAPP 357
Query: 337 XGXGXNPXXXXPPPPXG 287
G P PP G
Sbjct: 358 SGGPPGPFDPSGAPPSG 374
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = -3
Query: 502 GGPXXXXEKXGG---GXXPPLFXXGGGXXFXXPXGX--GXXXPPGGXXPPXXXKXXXGPP 338
GGP + G G P F G P G PP G PP PP
Sbjct: 374 GGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGG-PPGPFNPSGAPP 432
Query: 337 XGXGXNPXXXXPPPPXG 287
G P PP G
Sbjct: 433 SGGPPGPFNPSGAPPSG 449
Score = 27.9 bits (59), Expect = 7.9
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 5/77 (6%)
Frame = -3
Query: 502 GGPXXXXEKXGG---GXXPPLFXXGGGXXFXXPXGX--GXXXPPGGXXPPXXXKXXXGPP 338
GGP + G G P F G P G PP G PP PP
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGG-PPGPFNPSGAPP 447
Query: 337 XGXGXNPXXXXPPPPXG 287
G P PP G
Sbjct: 448 SGGPPGPFNPSGAPPSG 464
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKGG 457
GGGG G G GG P PP PP P P GG
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKGG 457
GGGG G G GG P PP PP P P GG
Sbjct: 268 GGGGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +3
Query: 333 PXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPPXX 512
P G P PP G P P G PPP G PPP PPP
Sbjct: 275 PYGPPHPMHHPYAMMPPPFGFFPPPPRG--HFPPPPPHFMGRGMPPPFMP-----PPPHF 327
Query: 513 XXXPXXGXXXXP 548
P G P
Sbjct: 328 GMGPPRGFMPPP 339
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/72 (30%), Positives = 22/72 (30%)
Frame = +3
Query: 333 PXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPPXX 512
P G P PP G P P G PPP G PPP PPP
Sbjct: 275 PYGPPHPMHHPYAMMPPPFGFFPPPPRG--HFPPPPPHFMGRGMPPPFMP-----PPPHF 327
Query: 513 XXXPXXGXXXXP 548
P G P
Sbjct: 328 GMGPPRGFMPPP 339
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/61 (34%), Positives = 21/61 (34%), Gaps = 5/61 (8%)
Frame = +3
Query: 339 GGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXX-----PPPXFSXXXXGPP 503
G P F G P P P G PPP RGG PPP F G P
Sbjct: 754 GAPPPPFGRGAG---PMSSFPPPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGGGP 810
Query: 504 P 506
P
Sbjct: 811 P 811
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = -3
Query: 415 PXGXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
P G PP PP G G P PPPP G
Sbjct: 734 PMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRG 776
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -1
Query: 408 GXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
G G PP+G PP PP + G PPPP G
Sbjct: 723 GVGPPPPQG--IPPMGFDPNKPPPPMFQQGFNAGAPPPPFG 761
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 384 PGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
P G P P P P +GG PPP PPP
Sbjct: 764 PVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXX--GGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGG 456
GPPG G P G N G P G P G P P P P
Sbjct: 222 GPPGPQGPPGADGLPGNPGAPGVPGQVIEVPGTPGPAGPPGPPGPIGPPGQPGAPGSSQP 281
Query: 457 GXXXPP 474
G PP
Sbjct: 282 GPQGPP 287
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -1
Query: 372 PPXXKKXXGAPPXVXXXTPXXGXPPPP 292
PP + GAPP P G PPPP
Sbjct: 566 PPLPQNLSGAPPPPPPPPPMLGGPPPP 592
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 384 PGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGPPP 506
P G P P P P +GG PPP PPP
Sbjct: 764 PVGVGVPPPPPPPSAIPLPPRLQGGIPPPPPLGIIPPPPPP 804
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +2
Query: 338 GGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPPPXXKKG 454
GG P PP G PP PP PPP + G
Sbjct: 75 GGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSG 113
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +1
Query: 286 PPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGG 456
PPG G P GGP PPP G P P PPP + G
Sbjct: 65 PPGPHGMPFM--------GGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPPQSG 113
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 438 GGGXFXXXXGGXGGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXGS 283
GGG GG GG GG A V P G PPPP S
Sbjct: 113 GGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPVSLPAPSYGGPPPPAPS 164
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 411 GGXGGXPPRGGXXPPXXKKXXGAP-PXVXXXTPXXGXPPP 295
GG G PP G PP G P + P G PPP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 381 PPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGP-PPXXXXXPXXG 533
PPGG P P PPP G PPP G PP P G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP----GMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 289 PGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGG 393
PGGGG P G N GG + G P PGG
Sbjct: 43 PGGGGQPPYPGSNSNQGGGG---YPGQGGAPYPGG 74
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 289 PGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGG 393
PGGGG P G N GG + G P PGG
Sbjct: 85 PGGGGQPPYPGSNSNQGGGG---YPGQGGAPYPGG 116
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +3
Query: 288 PXGGGGXXXXGXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXP 467
P G G G P P G P G PPG P G P K P
Sbjct: 211 PTGEPGKVINGAPPGPPGPPGPP-GPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLP 269
Query: 468 PPXFSXXXXGPP 503
P GPP
Sbjct: 270 GPHGGTGPRGPP 281
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 411 GGXGGXPPRGGXXPPXXKKXXGAP-PXVXXXTPXXGXPPP 295
GG G PP G PP G P + P G PPP
Sbjct: 785 GGPGAPPPPGMRPPPGAPGGGGGMYPPLIPTRPGPGGPPP 824
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +3
Query: 381 PPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXGP-PPXXXXXPXXG 533
PPGG P P PPP G PPP G PP P G
Sbjct: 773 PPGGRQAPMPPRGGPGAPPPP----GMRPPPGAPGGGGGMYPPLIPTRPGPG 820
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/69 (34%), Positives = 25/69 (36%)
Frame = +3
Query: 318 GXXPKPXGGPXXFFXXXGGXXPPGGXXXPXPXGXXKXXPPPXXKRGGXXPPPXFSXXXXG 497
G P P GG + GG PP G G PPP GG PPP G
Sbjct: 1557 GGLPPPHGGMNGW---RGGPPPPRG-------GSHCQGPPPLM--GG--PPPRLGMPPPG 1602
Query: 498 PPPXXXXXP 524
PPP P
Sbjct: 1603 PPPPNGGPP 1611
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/47 (36%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 432 GXFXXXXGGXGGXPPRGGXXPP-XXKKXXGAPPXVXXXTPXXGXPPP 295
G GG G RGG PP G PP + P G PPP
Sbjct: 1557 GGLPPPHGGMNGW--RGGPPPPRGGSHCQGPPPLMGGPPPRLGMPPP 1601
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = -1
Query: 411 GGXGGXPPRGGXXPPXXKKXXGAPPXVXXX-TPXXGXPPPPXG 286
G G PP G P + G PP +P G PPP G
Sbjct: 1445 GSWRGGPPMRGMPPLGMMRGRGGPPPPRGMNSPMRGMPPPMRG 1487
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 402 GGXPPRGGXXPPXXKKXXGAPPXVXXXTPXXGXPPPPXG 286
G PPRGG G PP P G PPP G
Sbjct: 1572 GPPPPRGGSHCQGPPPLMGGPPP-RLGMPPPGPPPPNGG 1609
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 409 GXGXXXPPGGXXPPXXXKXXXGPPXGXGXNPXXXXPPPPXG 287
G G PPG PP P G G P PP G
Sbjct: 260 GPGSVGPPGPQGPPGLAGPDGQPGHGGGGQPGPQGPPGDDG 300
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXN--XXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGG 456
GPPG GG P G + G P G PPG P P GG
Sbjct: 231 GPPGPGGPPGQDGHPGDAGAPGAPGQVVAGPGSVGPPG---PQGPPGLAGPDGQPGHGGG 287
Query: 457 GXXXP 471
G P
Sbjct: 288 GQPGP 292
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPP 436
GG G P G GG P GG P PP PP + PP
Sbjct: 616 GGPGGPGGG------GGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/48 (35%), Positives = 18/48 (37%)
Frame = +2
Query: 293 GGGGXPXXGVXXXTXGGAPXXFXXXGGXXPPRGGXPPXPPXXXKXXPP 436
GG G P G GG P GG P PP PP + PP
Sbjct: 616 GGPGGPGGG------GGPPRGPGGGGGGGPTGPPAPPKPPAKPRGRPP 657
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGGX 462
G PG G P G P P PGG P PP P G
Sbjct: 117 GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Query: 463 XXP 471
P
Sbjct: 177 AGP 179
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGGX 462
G PG G P G P P PGG P PP P G
Sbjct: 117 GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Query: 463 XXP 471
P
Sbjct: 177 AGP 179
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGGX 462
G PG G P G P P PGG P PP P G
Sbjct: 117 GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Query: 463 XXP 471
P
Sbjct: 177 AGP 179
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXPXXXXKXPPPPXXKGGGX 462
G PG G P G P P PGG P PP P G
Sbjct: 117 GKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSP 176
Query: 463 XXP 471
P
Sbjct: 177 AGP 179
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = -1
Query: 504 GGGXXXXXKKXGXXXXPPFXXXGGGXFXXXXGGXGGXPPRGG 379
GGG + G PP GG GG GG RGG
Sbjct: 132 GGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGG 173
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXP 411
GPPG G P G N G P G P G P P
Sbjct: 204 GPPGTSGNPGTDGAPGN-PGAPGQVTETPGTPGPAGAAGPPGP 245
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 283 GPPGGGGXPXXXGXXXNXXGGPXXFFXXXGXXPPPGGXXXPXP 411
GPPG G P G N G P G P G P P
Sbjct: 214 GPPGPAGNPGTDGAPGN-PGAPGQVTETPGTPGPAGAAGPPGP 255
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,854,597
Number of Sequences: 27780
Number of extensions: 348102
Number of successful extensions: 2107
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1396
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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