Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_D07
(786 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 121 1e-27
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 121 1e-27
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 117 2e-26
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 117 2e-26
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 114 1e-25
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 114 1e-25
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 112 5e-25
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 112 5e-25
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 111 1e-24
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 111 1e-24
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 111 1e-24
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 111 1e-24
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 111 1e-24
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 111 1e-24
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 106 4e-23
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 106 4e-23
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 103 2e-22
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 103 2e-22
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 103 2e-22
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 101 1e-21
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 99 8e-21
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 76 5e-14
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 65 1e-10
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 64 2e-10
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 57 2e-08
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 43 4e-04
BT021949-1|AAX51654.1| 819|Drosophila melanogaster LD12033p pro... 29 5.4
AE014296-2720|AAF49474.1| 819|Drosophila melanogaster CG16807-P... 29 5.4
AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA... 29 7.2
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 121 bits (292), Expect = 1e-27
Identities = 68/148 (45%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYIL---LRPE-QFGF 189
WKLG I ++ KPGK R+P+SYRPI+LL + K+FERL+ RI + + PE QFGF
Sbjct: 492 WKLGIISMIHKPGKPEREPASYRPISLLPSISKVFERLIAVRIVSIMEAQGITPEHQFGF 551
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R+GH T QL RV+ + +S +Y ++ LDI +AFDRVWH GL K++ LP +
Sbjct: 552 RAGHCTVEQLHRVVEQILTAYDSKEYCNSLFLDIREAFDRVWHIGLQLKIKQT-LPAPYF 610
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
LL SYLEG F V A S+ + A
Sbjct: 611 GLLKSYLEGRRFAVRFHSAISTEHNVAA 638
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 121 bits (291), Expect = 1e-27
Identities = 61/148 (41%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
WK+ I+++ KPGK P SYRPI+LLS + KL+ERL+ R++ + +L QFGF
Sbjct: 493 WKMAAILMIHKPGKPEESPESYRPISLLSSLSKLWERLIANRLNDIMTERRILPDHQFGF 552
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R GHST Q+ R+ H+ + +Y AV +D+++AFDRVWH+GL+ K++ P +
Sbjct: 553 RQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRVWHDGLISKVKKL-FPAPYY 611
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
+L SYLE F V V + S R + A
Sbjct: 612 GVLKSYLEDRRFMVRVRNSYSIPRVMRA 639
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 117 bits (281), Expect = 2e-26
Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
WK I+++PKPGKD+ +PSSYRPI+LL+ + KLFE++LL RISP++ L QFGF
Sbjct: 488 WKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGF 547
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ R+ + +Y A+ LD+ +AFDRVW +GL+ K+ LP
Sbjct: 548 REKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTH 606
Query: 370 RLLGSYLEGXTFFVAVEGARS 432
+LL SYL F + + + S
Sbjct: 607 KLLKSYLYNRVFAIRCDTSTS 627
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 117 bits (281), Expect = 2e-26
Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 4/141 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
WK I+++PKPGKD+ +PSSYRPI+LL+ + KLFE++LL RISP++ L QFGF
Sbjct: 488 WKKSTIVMIPKPGKDKTQPSSYRPISLLTCLSKLFEKMLLLRISPHLRINNTLPTHQFGF 547
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ R+ + +Y A+ LD+ +AFDRVW +GL+ K+ LP
Sbjct: 548 REKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRVWLDGLLFKIIKL-LPQNTH 606
Query: 370 RLLGSYLEGXTFFVAVEGARS 432
+LL SYL F + + + S
Sbjct: 607 KLLKSYLYNTVFAIRCDTSTS 627
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 114 bits (275), Expect = 1e-25
Identities = 62/148 (41%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRI---SPYILLRPE-QFGF 189
WK II++ K GK SYRPI+LL +GK+ ERL+L R+ P+ QFGF
Sbjct: 296 WKSASIIMIHKTGKTPTDVDSYRPISLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGF 355
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T QL RV++ + + +Y V LDI++AFDRVWH GL++K + P ++
Sbjct: 356 RLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYL 415
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
++ S+LE TF V+V+G +SS++PI A
Sbjct: 416 -VVKSFLEERTFHVSVDGYKSSIKPIAA 442
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 114 bits (274), Expect = 1e-25
Identities = 62/148 (41%), Positives = 88/148 (59%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISP----YILLRPEQFGF 189
WK+ KII++PKPGK+ SSYRPI+LLS + KLFE+ LL R++ + ++ QFGF
Sbjct: 490 WKMMKIIMIPKPGKNHTVASSYRPISLLSCISKLFEKCLLIRLNQHQTYHNIIPAHQFGF 549
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ R+ + +Y AV LD+ +AFD+VW +GL+ K++ LP +
Sbjct: 550 RESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKVWLDGLMFKIK-ISLPESTH 608
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
+LL SYL F V A S+V I A
Sbjct: 609 KLLKSYLYDRKFAVRCNTATSTVHTIEA 636
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 112 bits (270), Expect = 5e-25
Identities = 61/148 (41%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRI---SPYILLRPE-QFGF 189
WK II++ K GK SYRP +LL +GK+ ERL+L R+ P+ QFGF
Sbjct: 494 WKSASIIMIHKTGKTPTDVDSYRPTSLLPSLGKIMERLILNRLLTCKDVTKAIPKFQFGF 553
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T QL RV++ + + +Y V LDI++AFDRVWH GL++K + P ++
Sbjct: 554 RLQHGTPEQLHRVVNFALEAMENKEYAVGAFLDIQQAFDRVWHPGLLYKAKRLFPPQLYL 613
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
++ S+LE TF V+V+G +SS++PI A
Sbjct: 614 -VVKSFLEERTFHVSVDGYKSSIKPIAA 640
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 112 bits (270), Expect = 5e-25
Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK +P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 549 WKHAQVKMILKPGKSSNEPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 608
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 609 RKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 667
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 668 IILESYLTNRTFEVKDQAGETS 689
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 111 bits (266), Expect = 1e-24
Identities = 61/142 (42%), Positives = 83/142 (58%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK +P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 537 WKHAQVKMILKPGKSANEPRSYRPISLLSGLSKIFERLLLKRLFKVDLFKKAIPLHQFGF 596
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H + Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 597 RKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 655
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 656 IILESYLTNRTFEVKDQAGETS 677
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 111 bits (266), Expect = 1e-24
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 421 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 480
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 481 RKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 539
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 540 IILESYLTNRTFEVKDQAGETS 561
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 111 bits (266), Expect = 1e-24
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 537 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 596
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 597 RKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 655
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 656 IILESYLTNRTFEVKDQAGETS 677
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 111 bits (266), Expect = 1e-24
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 537 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 596
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 597 RKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 655
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 656 IILESYLTNRTFEVKDQAGETS 677
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 111 bits (266), Expect = 1e-24
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 499 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 558
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 559 RKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 617
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 618 IILESYLTNRTFEVKDQAGETS 639
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 111 bits (266), Expect = 1e-24
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRP----EQFGF 189
WK ++ ++ KPGK P SYRPI+LLS + K+FERLLL+R+ L + QFGF
Sbjct: 537 WKHAQVKMILKPGKSVNDPKSYRPISLLSGLSKMFERLLLKRLFRVDLFKKAIPLHQFGF 596
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H T Q+ RV + + +Y AV LDI +AFDRVWHEGL+ KL LP+
Sbjct: 597 RKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRVWHEGLLLKLAKI-LPYNLY 655
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+L SYL TF V + +S
Sbjct: 656 IILESYLTNRTFEVKDQAGETS 677
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 106 bits (254), Expect = 4e-23
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
WK+ KI+ + KPGK P SYRPI+LLS + K+ E+L+ R+ ++ L Q+GF
Sbjct: 517 WKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGF 576
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R+G +T L ++ +++ + S Q V LDIE AFD VWH+GL+HKL+ G P +
Sbjct: 577 RNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLI 636
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
+++ ++L F V + ++S+ R + A
Sbjct: 637 KIVQNFLTHRYFSVNLNSSQSARRILNA 664
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 106 bits (254), Expect = 4e-23
Identities = 55/148 (37%), Positives = 89/148 (60%), Gaps = 4/148 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
WK+ KI+ + KPGK P SYRPI+LLS + K+ E+L+ R+ ++ L Q+GF
Sbjct: 465 WKIAKIVPILKPGKPPDNPESYRPISLLSGLSKILEKLIKLRLVKFLDIHNTLPTVQYGF 524
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R+G +T L ++ +++ + S Q V LDIE AFD VWH+GL+HKL+ G P +
Sbjct: 525 RNGLNTILPTLKLRNYIKESIQSKQSVGLVTLDIEAAFDTVWHDGLLHKLKMIGTPIYLI 584
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPITA 453
+++ ++L F V + ++S+ R + A
Sbjct: 585 KIVQNFLTHRYFSVNLNSSQSARRILNA 612
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 103 bits (248), Expect = 2e-22
Identities = 60/142 (42%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRPE-QFGF 189
WK I ++PKPGK +SYRPI+LLS + KL ER+LL+R I + P QFGF
Sbjct: 93 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGF 152
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 153 RKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLF 211
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
LL +YL TF V ++G +S
Sbjct: 212 DLLENYLSNRTFSVRIDGETTS 233
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 103 bits (248), Expect = 2e-22
Identities = 60/142 (42%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRPE-QFGF 189
WK I ++PKPGK +SYRPI+LLS + KL ER+LL+R I + P QFGF
Sbjct: 540 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGF 599
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 600 RKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLF 658
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
LL +YL TF V ++G +S
Sbjct: 659 DLLENYLSNRTFSVRIDGETTS 680
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 103 bits (248), Expect = 2e-22
Identities = 60/142 (42%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRPE-QFGF 189
WK I ++PKPGK +SYRPI+LLS + KL ER+LL+R I + P QFGF
Sbjct: 540 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILLKRLYDIDSFAKAIPSHQFGF 599
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 600 RKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLF 658
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
LL +YL TF V ++G +S
Sbjct: 659 DLLENYLSNRTFSVRIDGETTS 680
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 101 bits (241), Expect = 1e-21
Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRR---ISPYILLRPE-QFGF 189
WK I ++PKPGK +SYRPI+LLS + KL ER+L +R I + P QFGF
Sbjct: 540 WKHASISMIPKPGKSPFALNSYRPISLLSGLSKLLERILPKRLYDIDSFAKAIPSHQFGF 599
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
R H QL RV + + A LDI +AFDRVWH+GL++KL +P
Sbjct: 600 RKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRVWHDGLLYKLSRL-IPRYLF 658
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
LL +YL TF V ++G +S
Sbjct: 659 DLLENYLSNRTFSVRIDGETTS 680
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 98.7 bits (235), Expect = 8e-21
Identities = 58/142 (40%), Positives = 82/142 (57%), Gaps = 4/142 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
WK II++PKP KD+ +PS YRPI+LL+ + KLFE+ LL RISP++ L QF F
Sbjct: 30 WKKSIIIMIPKPEKDKTQPS-YRPISLLTCLSKLFEKGLLLRISPHLKTHNTLPSYQFDF 88
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
+ H Q+ R+ + +Y A+ LD+ +AFDRVW +GL+ K+ LP
Sbjct: 89 PAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRVWLDGLMFKIIQL-LPQNIH 147
Query: 370 RLLGSYLEGXTFFVAVEGARSS 435
+LL SYL+ F V + SS
Sbjct: 148 KLLKSYLDKRVFAVRCSSSTSS 169
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 76.2 bits (179), Expect = 5e-14
Identities = 43/143 (30%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Frame = +1
Query: 19 TWKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFG 186
TW+ II + KP K +SYRPI+LLS +GK E+++ +R++ +I L+ Q
Sbjct: 491 TWRSAIIIPISKPNKPPSDINSYRPISLLSCLGKTLEKIIAQRLTWFIKRHNLISHNQVA 550
Query: 187 FRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAH 366
F+S HST L R+ H ++ ++ + + D E+AFDRV ++ +L G+
Sbjct: 551 FKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLERWGIGPRL 610
Query: 367 VRLLGSYLEGXTFFVAVEGARSS 435
L+ +++ +F V + S+
Sbjct: 611 YNLIKAFMTNRSFRVRINNVTSN 633
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 64.9 bits (151), Expect = 1e-10
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRI-----SPYILLRPEQFG 186
WK K+++L K P SYRP+ LL VGKLFER+L RI SP L+ +Q+G
Sbjct: 458 WKKMKLVLLLKGKGPANVPRSYRPLCLLDIVGKLFERILYARIELITESP-TGLQGQQYG 516
Query: 187 FRSGHSTTLQLTRVL----HHLADRR---NSGQYTVAVLLDIEKAFDRVWHEGLVHKLRD 345
FR G ST L V L R S +Y + LD++ AF+ ++ +R+
Sbjct: 517 FRKGKSTLDALKSVTDAARKALDGNRWLGGSKKYCAIITLDVKNAFNTARWPIILGAMRN 576
Query: 346 AGLPHAHVRLLGSYL-EGXTFFVAVEGARS 432
G+P ++G+Y + ++V +G RS
Sbjct: 577 LGVPDYIRGVIGNYFRDRVLWYVTEDGPRS 606
Score = 32.7 bits (71), Expect = 0.58
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 453 TXEHTLARCSGFDEQRAALVAVIXEDLSLPRVXATML 563
T EH L CS F E+RA LVA+ LS + A M+
Sbjct: 922 TAEHILLHCSRFAEERAQLVALAGSPLSPRGLVAAMM 958
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 64.1 bits (149), Expect = 2e-10
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI----LLRPEQFGF 189
+K II + KP D+ K SSYRPI+L + K+ ++++ +R+ + L+ +QFGF
Sbjct: 487 YKTSLIIPILKPNTDKTKTSSYRPISLNCCIAKILDKIIAKRLWWLVTYNNLINDKQFGF 546
Query: 190 RSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHV 369
+ G ST+ L V + + S +T V LD +AFDRV ++ +L++ +
Sbjct: 547 KKGKSTSDCLLYVDYLIT---KSKMHTSLVTLDFSRAFDRVGVHSIIQQLQEWKTGPKII 603
Query: 370 RLLGSYLEGXTFFVAVEGARSSVRPI 447
+ + +++ V V SS P+
Sbjct: 604 KYIKNFMSNRKITVRVGPHTSSPLPL 629
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 57.2 bits (132), Expect = 2e-08
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Frame = +1
Query: 22 WKLGKIIVLPK-PGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPE----QFG 186
WK +++ L K P KD+ +PSSYR I LL GK+ E +++ R+ + PE QFG
Sbjct: 490 WKCPRVVSLLKGPDKDKCEPSSYRGICLLPVFGKVLEAIMVNRVREVL---PEGCRWQFG 546
Query: 187 FRSGHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAG 351
FR G V + ++ QY + +D + AFD V + +L D G
Sbjct: 547 FRQGRCVEDAWRHVKSSVG--ASAAQYVLGTFVDFKGAFDNVEWSAALSRLADLG 599
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 43.2 bits (97), Expect = 4e-04
Identities = 33/124 (26%), Positives = 52/124 (41%)
Frame = +1
Query: 25 KLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPEQFGFRSGHS 204
+L + + +PK +R P +RPI++ S + + +L R++ I P Q GF
Sbjct: 396 RLARTVFIPKTVTAKR-PQDFRPISVPSVLVRQLNAILATRLNSSINWDPRQRGFLPTDG 454
Query: 205 TTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRLLGS 384
T V L + LD+ KAFD + H + LR G P V + +
Sbjct: 455 CADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQN 514
Query: 385 YLEG 396
EG
Sbjct: 515 TYEG 518
>BT021949-1|AAX51654.1| 819|Drosophila melanogaster LD12033p
protein.
Length = 819
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 243 CQVMQDTGQLQSRRVAASKAELLRPEENIRRYSPQEQPLEQLAHVREQG 97
CQ+M++ G++++ R A S E E ++ +PQ+ A VR +G
Sbjct: 141 CQLMEEEGRVRALRAARSLGERTVTELILQHQNPQQLSSNLWAAVRTRG 189
>AE014296-2720|AAF49474.1| 819|Drosophila melanogaster CG16807-PA
protein.
Length = 819
Score = 29.5 bits (63), Expect = 5.4
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = -1
Query: 243 CQVMQDTGQLQSRRVAASKAELLRPEENIRRYSPQEQPLEQLAHVREQG 97
CQ+M++ G++++ R A S E E ++ +PQ+ A VR +G
Sbjct: 141 CQLMEEEGRVRALRAARSLGERTVTELILQHQNPQQLSSNLWAAVRTRG 189
>AE014298-1934|AAF48296.2| 1384|Drosophila melanogaster CG2691-PA
protein.
Length = 1384
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 59 ARTGESPPVTDRLPCSRTWASCSSGCS*GEYRRIFSSGRSNSAL 190
A TG +P T + +T+AS SGCS ++++ +S RS+SAL
Sbjct: 101 APTGTAP--TGTIKTFQTFASNYSGCSNTCFQKLVTSFRSSSAL 142
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,892,336
Number of Sequences: 53049
Number of extensions: 591096
Number of successful extensions: 2123
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2093
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3634208604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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