Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_D07
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 81 7e-16
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 56 3e-08
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 56 3e-08
U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical pr... 28 8.7
Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical pr... 28 8.7
U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cycla... 28 8.7
AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor typ... 28 8.7
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 81.4 bits (192), Expect = 7e-16
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 4/127 (3%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYILLRPEQFGFRSGH 201
WK +I++PKP KD SSYRPI+LLS + KL E+ +L+RI I Q GF+ H
Sbjct: 384 WKKANVIMIPKPKKDPAIASSYRPISLLSPIAKLLEKAILKRIKNSIESPAHQHGFKPEH 443
Query: 202 STTLQLTRVLHHL---ADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVR 372
STT + +V + + + +N + + LD+ AFD+V + L + L +A ++
Sbjct: 444 STTTAVIQVTNDIIGGLNMKNPPERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIK 503
Query: 373 L-LGSYL 390
L LG+YL
Sbjct: 504 LWLGNYL 510
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI-LLRP-EQFGFRS 195
WK K ++ K G DR +YRPI LL + K+F + LL R+ + +P EQ GFR
Sbjct: 432 WKTSKTTLIFKKG-DRENLENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPVEQAGFRR 490
Query: 196 GHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRL 375
ST + + L R V +D +KAFD V H+ + L + G A++ L
Sbjct: 491 SFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDL 550
Query: 376 L 378
L
Sbjct: 551 L 551
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI-LLRP-EQFGFRS 195
WK K ++ K G DR +YRPI LL + K+F + LL R+ + +P EQ GFR
Sbjct: 603 WKTSKTTLIFKKG-DRENLENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPVEQAGFRR 661
Query: 196 GHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRL 375
ST + + L R V +D +KAFD V H+ + L + G A++ L
Sbjct: 662 SFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 721
Query: 376 L 378
L
Sbjct: 722 L 722
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 56.0 bits (129), Expect = 3e-08
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +1
Query: 22 WKLGKIIVLPKPGKDRRKPSSYRPITLLSHVGKLFERLLLRRISPYI-LLRP-EQFGFRS 195
WK K ++ K G DR +YRPI LL + K+F + LL R+ + +P EQ GFR
Sbjct: 342 WKTSKTTLIFKKG-DRENLENYRPICLLPVLYKVFTKCLLNRMRRSLDEAQPVEQAGFRR 400
Query: 196 GHSTTLQLTRVLHHLADRRNSGQYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRL 375
ST + + L R V +D +KAFD V H+ + L + G A++ L
Sbjct: 401 SFSTIDHIHSLQRLLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 460
Query: 376 L 378
L
Sbjct: 461 L 461
>U97405-1|AAB53007.1| 327|Caenorhabditis elegans Hypothetical
protein T09B4.5a protein.
Length = 327
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -2
Query: 458 RCAVMGRTEDRAPSTATKKVXPSRYDPSSRT*ACGRP--ASRSL*TSPSCHTRS 303
+ A GRT + P T +K PS SR+ + GRP ASR ++PS + S
Sbjct: 63 KSATRGRTASKTPKTPSK--TPSSASARSRSRSRGRPTNASRLSASTPSASSTS 114
>Z99279-2|CAD89758.1| 500|Caenorhabditis elegans Hypothetical
protein Y57G11A.1b protein.
Length = 500
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -1
Query: 210 SRRVAASKAELLRPEENIRRYSPQEQPLEQLAHVREQGNRSVTGGLSPVL 61
+R+ A ++ E++ EE + Y+P + ++ RE+ + G SPVL
Sbjct: 266 ARKSAKAQEEVVGEEEANKGYNPLDVEVKMAGKAREKFRQIDASGASPVL 315
>Z99279-1|CAB16496.4| 598|Caenorhabditis elegans Hypothetical
protein Y57G11A.1a protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -1
Query: 210 SRRVAASKAELLRPEENIRRYSPQEQPLEQLAHVREQGNRSVTGGLSPVL 61
+R+ A ++ E++ EE + Y+P + ++ RE+ + G SPVL
Sbjct: 266 ARKSAKAQEEVVGEEEANKGYNPLDVEVKMAGKAREKFRQIDASGASPVL 315
>U42436-12|AAF99901.1| 1206|Caenorhabditis elegans Guanylyl cyclase
protein 8 protein.
Length = 1206
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 262 QYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRLLGSY 387
QY A+++D +FD + +++D GL A V + Y
Sbjct: 349 QYANAIIIDDVNSFDNTIVGPFIERIKDVGLTEADVDIANIY 390
>AB201388-1|BAE78828.1| 1152|Caenorhabditis elegans recepotor type
guanyly cyclase protein.
Length = 1152
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 262 QYTVAVLLDIEKAFDRVWHEGLVHKLRDAGLPHAHVRLLGSY 387
QY A+++D +FD + +++D GL A V + Y
Sbjct: 323 QYANAIIIDDVNSFDNTIVGPFIERIKDVGLTEADVDIANIY 364
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,921,689
Number of Sequences: 27780
Number of extensions: 271335
Number of successful extensions: 939
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 938
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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