Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_D05
         (815 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.     32   2.2  
AK131497-1|BAD18641.1|  930|Homo sapiens protein ( Homo sapiens ...    31   3.8  
U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.                  30   8.7  
CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.                30   8.7  
BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5 pr...    30   8.7  
AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.                30   8.7  
AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.          30   8.7  
AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.                30   8.7  

>AB028975-1|BAA83004.2| 1456|Homo sapiens KIAA1052 protein protein.
          Length = 1456

 Score = 32.3 bits (70), Expect = 2.2
 Identities = 20/69 (28%), Positives = 36/69 (52%)
 Frame = +1

Query: 547  AISATSTRSSNPRFHTPTTPDLTSISINPLNAVLKXVRAGVKASVVIXXSIXVSXPPRHW 726
            ++S+ S+ S +P  H  +TP LTS  I+ L+  L+ + + + + + I  S+    PP   
Sbjct: 1232 SLSSESSESFSPP-HLDSTPSLTSRKIHGLSHSLRQISSQLSSVLSILDSLNPQSPPPLL 1290

Query: 727  AWLKGVRPP 753
            A +    PP
Sbjct: 1291 ASMPAQLPP 1299


>AK131497-1|BAD18641.1|  930|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16696 fis, clone TRACH3003832, weakly  similar
           to Mus musculus PHD finger protein 2 (Phf2). ).
          Length = 930

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
 Frame = +2

Query: 281 WHRNQIEQCHCAITTERLLHHKRLPRRVSCQS*GCRFSFPPSLKIPVTVDLCWTTADVTV 460
           W    +    C       LH+  +  ++ C     R   P   K P    +CW  A   +
Sbjct: 352 WIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLL 411

Query: 461 EGVNVLATPSSSRIT--IGGLALMHQATLPWRSRLHQPDH--QIPDSI 592
           E +  L        T  + G+  +H A   W  +    +H  +IPD++
Sbjct: 412 ETLKELREDGFQPQTYLVQGVKALHTALKLWMKKELVSEHAFEIPDNV 459


>U73825-1|AAB95090.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 560 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 646
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>CR457424-1|CAG33705.1|  465|Homo sapiens MADH5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 560 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 646
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>BC009682-1|AAH09682.1|  465|Homo sapiens SMAD family member 5
           protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 560 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 646
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>AF010601-1|AAB66353.1|  465|Homo sapiens SMAD5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 560 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 646
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


>AF009744-1|AAB82655.1|  462|Homo sapiens Mad homolog protein.
          Length = 462

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 560 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 646
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 163 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 190


>AF009678-1|AAB72180.1|  465|Homo sapiens Smad5 protein.
          Length = 465

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 560 HQPDHQ-IPDSIHQPPQT*HPFPSIP*TPY 646
           H P +   PDS HQP  T  PFP  P +PY
Sbjct: 166 HMPQNATFPDSFHQPNNT--PFPLSPNSPY 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,651,056
Number of Sequences: 237096
Number of extensions: 2217700
Number of successful extensions: 9129
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9129
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10147868276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)