Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_D03
(741 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.42
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 0.73
07_01_0080 + 587674-588510 30 1.7
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 30 2.2
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570 30 2.2
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 29 2.9
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 29 3.9
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 3.9
02_05_0686 - 30900748-30902167,30903442-30904742 29 3.9
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 29 5.1
06_01_0039 - 386576-387098,387173-387468,387744-388067,388165-38... 29 5.1
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 29 5.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 6.8
03_05_0067 - 20460206-20460703,20461255-20461530 28 6.8
03_01_0515 - 3864796-3865425 28 6.8
12_01_0551 + 4446937-4447353,4449141-4450013,4451206-4451244,445... 28 9.0
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 28 9.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 28 9.0
06_01_0553 + 3942907-3943617 28 9.0
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 9.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 9.0
02_05_1202 + 34932291-34933027,34933297-34933774 28 9.0
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 28 9.0
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 32.3 bits (70), Expect = 0.42
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXYXXXGG 397
PPPPP PPPP Y GG
Sbjct: 57 PPPPPVVTPTPQCPPPPSYPSGGG 80
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 0.73
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -1
Query: 480 GXXXPPPPPXXXXXKXTPPPPXYXXXGGXFXP 385
G PPPPP PPPP GG P
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGGLGGHQAP 1136
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 481 GXXXXPPPPPXXXXKKXPPPPXLFXXGGXFXP 386
G PPPPP PPPP + GG P
Sbjct: 1105 GAGAPPPPPPPGGITGVPPPPPIGGLGGHQAP 1136
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 1.7
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXLF 410
PPPPP PPPP LF
Sbjct: 105 PPPPPPPPPPPPPPPPPLF 123
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 479 GXXXPPPPPXXXXXKXPPPP 420
G PPPPP PPPP
Sbjct: 102 GSPPPPPPPPPPPPPPPPPP 121
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 29.9 bits (64), Expect = 2.2
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXY 412
PPPPP + PPPP Y
Sbjct: 93 PPPPPPLPQHRLEPPPPHY 111
>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
Length = 378
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXYXXXGGXF 391
PPPPP K P P Y GG F
Sbjct: 170 PPPPPPPPASKSDHPAPLYGEGGGGF 195
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXY 412
PPPPP + PPPP Y
Sbjct: 769 PPPPPFSVQQQQLPPPPPY 787
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.1 bits (62), Expect = 3.9
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2
Query: 467 PPPPPXXXXXKXPPPP 420
PPPPP K PPPP
Sbjct: 56 PPPPPPPQPAKEPPPP 71
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXLFXXGG 398
PPPPP + PPPP GG
Sbjct: 52 PPPPPPPPTQPAPPPPPPARSGG 74
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXYXXXGG 397
PPPPP PPPP GG
Sbjct: 53 PPPPPPPTQPAPPPPPPARSGGGG 76
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXYXXXGGXFXP 385
PPPPP PPPP GG P
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPP 380
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXLFXXGGXFXP 386
PPPPP + PPPP G + P
Sbjct: 126 PPPPPAYGHQAYPPPPPNREPGHGYHP 152
>06_01_0039 -
386576-387098,387173-387468,387744-388067,388165-388276,
388355-388482,388914-389048,389122-389250,389620-389787,
389897-390019,390099-390227,390543-390866,390946-392901
Length = 1448
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXL 413
PPPPP + PPPP L
Sbjct: 58 PPPPPPNAEPEAPPPPQL 75
>02_01_0458 +
3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2
Query: 467 PPPPPXXXXXKXPPPPXXI 411
PPPPP + PPPP I
Sbjct: 362 PPPPPPPPPPRPPPPPPPI 380
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 6.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPP 419
PPPPP + PPPP
Sbjct: 606 PPPPPILPNRSVPPPP 621
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPP 419
PPPPP KK P PP
Sbjct: 750 PPPPPLMTGKKAPAPP 765
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPP 418
PPPPP + PPPP
Sbjct: 605 PPPPPPILPNRSVPPPP 621
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPP 418
PPPPP + PPPP
Sbjct: 638 PPPPPPSLPNRLVPPPP 654
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -1
Query: 468 PPPPPXXXXXKXTPPPPXY 412
PPPPP PPPP Y
Sbjct: 14 PPPPPQYFQAGPPPPPPQY 32
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 481 GXXXXPPPPPXXXXKKXPPPP 419
G PPPPP PPPP
Sbjct: 67 GPLMPPPPPPPSVTSSPPPPP 87
Score = 28.3 bits (60), Expect = 6.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXL 413
PPPPP PPPP L
Sbjct: 71 PPPPPPPSVTSSPPPPPL 88
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -1
Query: 480 GXXXPPPPPXXXXXKXTPPPP 418
G PPPPP PPPP
Sbjct: 67 GPLMPPPPPPPSVTSSPPPPP 87
>12_01_0551 +
4446937-4447353,4449141-4450013,4451206-4451244,
4452339-4452581
Length = 523
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPP 419
PPPPP + PPPP
Sbjct: 38 PPPPPPPLPRPRPPPP 53
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 479 GXXXPPPPPXXXXXKXPPPP 420
G PPPPP PPPP
Sbjct: 622 GAPPPPPPPGKPGGPPPPPP 641
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 479 GXXXPPPPPXXXXXKXPPPP 420
G PPPPP PPPP
Sbjct: 927 GAPPPPPPPGKPGGPPPPPP 946
>06_01_0553 + 3942907-3943617
Length = 236
Score = 27.9 bits (59), Expect = 9.0
Identities = 18/52 (34%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Frame = -1
Query: 468 PPPPPXXXXXKXT--PPPPXYXXXGG-XFXPXKXKXKKKKKNXXFXXGGGGK 322
PPPPP PPPP GG + K N GGGGK
Sbjct: 119 PPPPPQLWKPPRARAPPPPSATRNGGRKMALLRHLSKPMLTNHSSGGGGGGK 170
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -2
Query: 479 GXXXPPPPPXXXXXKXPPPP 420
G PPPPP PPPP
Sbjct: 317 GTGAPPPPPAHPAAPAPPPP 336
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXL 413
PPPPP PPPP L
Sbjct: 350 PPPPPPPPPPPPPPPPKL 367
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 467 PPPPPXXXXXKXPPPP 420
PPPPP + PPPP
Sbjct: 7 PPPPPSSLQLRRPPPP 22
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 27.9 bits (59), Expect = 9.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 466 PPPPPXXXXKKXPPPPXL 413
PPPPP PPPP L
Sbjct: 40 PPPPPPPPPPPPPPPPPL 57
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,211,762
Number of Sequences: 37544
Number of extensions: 351274
Number of successful extensions: 5738
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3341
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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