Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_C22
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 37 0.024
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 34 0.17
07_03_1136 + 24218601-24218734,24218769-24219906 33 0.29
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 33 0.29
07_03_1713 + 28939446-28939574,28939674-28940231,28940338-289404... 32 0.67
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.7
12_01_0524 - 4167867-4168445 29 3.6
12_02_0800 + 23299674-23299678,23299714-23299791,23299876-232999... 29 4.7
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 6.3
01_05_0669 - 24152057-24152110,24152224-24152308,24152401-241524... 29 6.3
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 8.3
07_03_1747 + 29188568-29188715,29188793-29189541 28 8.3
04_01_0530 - 6928528-6929500,6929514-6930964 28 8.3
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.3
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 8.3
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 36.7 bits (81), Expect = 0.024
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +1
Query: 646 PXPGXXGGRPPXXRXHXXFPGXPPP-GXXXXGRXPGXXXGPXXPXPRXXXVXXGPXXPPL 822
P G GG PP P PPP G G P P P P V GP PP
Sbjct: 1165 PPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMP--PGVPGGPPPPPG 1222
Query: 823 SPGXP 837
G P
Sbjct: 1223 GRGLP 1227
Score = 33.9 bits (74), Expect = 0.17
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 2/66 (3%)
Frame = +1
Query: 646 PXPGXXGGRPPXXRXHXXF--PGXPPPGXXXXGRXPGXXXGPXXPXPRXXXVXXGPXXPP 819
P P GG PP P PPP G P G P P G PP
Sbjct: 1140 PLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPP 1199
Query: 820 LSPGXP 837
PG P
Sbjct: 1200 TPPGAP 1205
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 332 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVGG 168
H P AAA P VP++ P L + S GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -3
Query: 779 GXGXXGPXXXPGXRPXXXXPGGGXPGXXXWXLXXGGRPPSXPGXG 645
G G GP G RP GGG P GG P PG G
Sbjct: 94 GGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGG 138
Score = 28.7 bits (61), Expect = 6.3
Identities = 23/71 (32%), Positives = 23/71 (32%), Gaps = 6/71 (8%)
Frame = -3
Query: 839 PGXPGLXGGXXGPXXTXXXRGXGXX---GPXXXPGX---RPXXXXPGGGXPGXXXWXLXX 678
P PG GG P G G P G RP GGG PG
Sbjct: 132 PPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGG 191
Query: 677 GGRPPSXPGXG 645
GG P PG G
Sbjct: 192 GGGPGRAPGGG 202
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 33.1 bits (72), Expect = 0.29
Identities = 18/47 (38%), Positives = 18/47 (38%)
Frame = +1
Query: 703 PGXPPPGXXXXGRXPGXXXGPXXPXPRXXXVXXGPXXPPLSPGXPGA 843
P PPP R PG GP P GP PP PG P A
Sbjct: 350 PPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPP-PPALPGGPRA 395
Score = 32.7 bits (71), Expect = 0.39
Identities = 21/64 (32%), Positives = 21/64 (32%), Gaps = 1/64 (1%)
Frame = +1
Query: 655 GXXGGRPPXXRXHXXFPGXPPPGXXXXGRXPGXXXGPXXPXPRXXXVXXGPXXP-PLSPG 831
G G PP H P PPP G GP P P P P P P
Sbjct: 315 GAGTGAPPPPPAHPAAPAPPPPAPSPSA--AGAGSGPPPPPPPAAPAAPRPPGPGPGPPP 372
Query: 832 XPGA 843
PGA
Sbjct: 373 PPGA 376
>07_03_1713 +
28939446-28939574,28939674-28940231,28940338-28940460,
28940676-28940912
Length = 348
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = +1
Query: 673 PPXXRXHXXFPGXPPPGXXXXGRXPGXXXGPXXPXPRXXXVXXGPXXPPLSPGXPGA 843
PP H +P PP G P P P P G PP+ P PGA
Sbjct: 128 PPPAYGHQAYPPPPPNREPGHGYHPAPAFYPPQPPPSHDEPGYGYRPPPVGP--PGA 182
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = +1
Query: 628 PXAXHXPXPGXXGGRPPXXRXHXXFPGXPPPGXXXXGRXPGXXXGPXXPXPRXXXVXXGP 807
P P P G PP P PPPG G GP P P+ G
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG--------GKKGGPPPPPPK-----GGA 386
Query: 808 XXPPLSPGXP 837
PP +PG P
Sbjct: 387 SRPPAAPGVP 396
>12_01_0524 - 4167867-4168445
Length = 192
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -3
Query: 329 QPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVR 150
QPS+AA P + + + + YSH G + S + G + G GGG P V
Sbjct: 104 QPSSAAVAPLPSSTNLKSAVRSAMGSYSHSGTRRVHFGDSTVLG--EKAAGAGGGEPAV- 160
Query: 149 CEERVDHEGQ*C 114
EE + E + C
Sbjct: 161 VEEVEEEEEKEC 172
>12_02_0800 +
23299674-23299678,23299714-23299791,23299876-23299920,
23300052-23300415,23300493-23300574,23300793-23300873,
23300974-23302106,23302202-23302350,23302426-23302516,
23303628-23305940
Length = 1446
Score = 29.1 bits (62), Expect = 4.7
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 646 PXPGXXGGRPPXXRXHXXFPGXPPPGXXXXGRXPGXXXGPXXP 774
P PG PP PG PP G G PG P P
Sbjct: 262 PYPGNFCVAPPHFDSWHAPPGHPPDGMWHRGAAPGGPYRPLGP 304
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 230 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 346
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>01_05_0669 -
24152057-24152110,24152224-24152308,24152401-24152486,
24153129-24154341,24154441-24154529,24154607-24154639,
24154674-24154859,24155290-24155380,24155588-24155622,
24155736-24155817,24155968-24156020,24156404-24156469,
24156752-24156820,24156821-24156984,24157925-24158432,
24158543-24158602
Length = 957
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +1
Query: 664 GGRPPXXRXHXXFPGXPPPGXXXXGRXPGXXXGPXXPXPRXXXVXXGPXXPPLSPGXP 837
GGR P + P PPP G P P P P V PP P P
Sbjct: 71 GGRGPPPSLYGYAPPQPPPALY--GAVPYNYGHPQQPGPPYGAVPYNYGPPPPQPQDP 126
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 236 VHRANTGRSSNELDRQTTELERRGVG 313
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 385 PPPGTTLSAPVYLITAPSPG*SAWTLALXFLCS*TXGPTTCRLARSSSVLG 537
PPP TT++ V L TA + S + F+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 65 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 205
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -2
Query: 414 GRGERSPRRWLQPRLAVPRQASTSVPRTP 328
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -2
Query: 411 RGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNS 289
R RSPRR P R + + R+PA S +P+R++S
Sbjct: 224 RDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,184,022
Number of Sequences: 37544
Number of extensions: 557375
Number of successful extensions: 1702
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1664
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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