Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_C15
(830 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 60 2e-11
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 54 1e-09
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 53 3e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 53 4e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 52 9e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 52 9e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 3e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 49 6e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 6e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 47 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 46 3e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 45 7e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 5e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.040
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.070
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.65
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.0
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 60.1 bits (139), Expect = 2e-11
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 9/153 (5%)
Frame = +3
Query: 84 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 242
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 243 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 416
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 417 VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
+ G V W + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 55.2 bits (127), Expect = 7e-10
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 9/147 (6%)
Frame = +3
Query: 102 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 260
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 261 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 434
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 435 VSWIKRLDISTPISMQLDXWPNDMQTC 515
V W + + ++ +P D QTC
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTC 163
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 54.4 bits (125), Expect = 1e-09
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 275
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 276 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 446
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 447 KRLDISTPISMQLDXWPNDMQTC 515
RL I M L+ +P D Q C
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRC 144
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 10/139 (7%)
Frame = +3
Query: 129 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 458
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAV 148
Query: 459 ISTPISMQLDXWPNDMQTC 515
+ S+ ++ +P D+QTC
Sbjct: 149 YKSSCSIDVEFFPYDVQTC 167
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 53.6 bits (123), Expect = 2e-09
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Frame = +3
Query: 129 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDIST 467
W E+G L V S+ +WRPD+VL NA A +A + + G V W +
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKS 151
Query: 468 PISMQLDXWPNDMQTC 515
+ ++ +P D QTC
Sbjct: 152 SCEIDVEYFPFDEQTC 167
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 53.2 bits (122), Expect = 3e-09
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 12/159 (7%)
Frame = +3
Query: 75 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 233
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 234 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 407
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 408 ---RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
+A + + G V W + + ++ +P D QTC
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 52.8 bits (121), Expect = 4e-09
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 10/139 (7%)
Frame = +3
Query: 129 MIDSLLATYDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 293
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 294 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 458
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 459 ISTPISMQLDXWPNDMQTC 515
+ + ++ +P D Q+C
Sbjct: 154 YKSSCEINVEYFPFDEQSC 172
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 52.0 bits (119), Expect = 7e-09
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 6/118 (5%)
Frame = +3
Query: 180 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 353
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 354 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.6 bits (118), Expect = 9e-09
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 293
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 294 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 467
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 468 PISMQLDXWPNDMQTC 515
+ + +P D Q C
Sbjct: 178 TCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 51.6 bits (118), Expect = 9e-09
Identities = 32/136 (23%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 129 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 293
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 294 WNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDIST 467
WN E+ G ++ +LW+PD+++ N+A G Y V++NGS ++ +
Sbjct: 118 WNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKS 177
Query: 468 PISMQLDXWPNDMQTC 515
+ + +P D Q C
Sbjct: 178 TCKIDITWFPFDDQHC 193
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
G Y V++NGS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.0 bits (114), Expect = 3e-08
Identities = 31/114 (27%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Frame = +3
Query: 183 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 359
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 360 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
+L N A + VS+ G V W+ + + ++ +P D Q C
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRC 145
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 49.6 bits (113), Expect = 3e-08
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
G Y V+++GS ++ + M + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 48.8 bits (111), Expect = 6e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.8 bits (111), Expect = 6e-08
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Frame = +3
Query: 102 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 266
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 267 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 437
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 438 SWIKRLDISTPISMQLDXWPNDMQTC 515
+ + WP D+ C
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNC 173
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.8 bits (111), Expect = 6e-08
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Frame = +3
Query: 81 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 245
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 246 RILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 419
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 420 SNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
NNG+ ++ + + + +P D Q C
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 219 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 392
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 393 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
G Y V+++GS ++ + + + +P D Q C
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 47.2 bits (107), Expect = 2e-07
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +3
Query: 117 SLSLMIDSLLATYDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 281
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 282 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 453 LDISTPISMQLDXWPNDMQTC 515
L I M+L +P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.4 bits (105), Expect = 3e-07
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 275
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 276 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 428
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 429 GSVSWIKRLDISTPISMQLDXWPNDMQTC 515
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 45.2 bits (102), Expect = 7e-07
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Frame = +3
Query: 108 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 275
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 276 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 428
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 429 GSVSWIKRLDISTPISMQLDXWPNDMQTC 515
GS++ RL I+ M L +P D Q C
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 12/141 (8%)
Frame = +3
Query: 129 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 287
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 288 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 453 LDISTPISMQLDXWPNDMQTC 515
+ ++ M L +P D Q C
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVC 174
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 44.4 bits (100), Expect = 1e-06
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 8/145 (5%)
Frame = +3
Query: 105 ENATSLSLMIDSLLATYDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 272
++ T+L + L YD P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 273 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 440
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 441 WIKRLDISTPISMQLDXWPNDMQTC 515
+ + + WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Frame = +3
Query: 129 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 287
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 288 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 452
L +N G T L + R+W PD+ N + + R+ NGSV + R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 453 LDISTPISMQLDXWPNDMQTC 515
+ ++ M L +P D Q C
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVC 174
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 39.1 bits (87), Expect = 5e-05
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 7/135 (5%)
Frame = +3
Query: 132 IDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 299
I +L YD P+ ++V + L + + I E I L W D+RL+++
Sbjct: 41 ISRILDGYDIRLRPNFGGEPLLVGMDLTIASFDAISEVNMDYTITMYLNQYWKDERLAFS 100
Query: 300 AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTP 470
E + +E++W PD N + D R R+S +GSV++ R +
Sbjct: 101 QEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLA 160
Query: 471 ISMQLDXWPNDMQTC 515
M L +P D Q C
Sbjct: 161 CMMDLHYYPLDSQNC 175
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 9/90 (10%)
Frame = +3
Query: 273 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 425
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 426 NGSVSWIKRLDISTPISMQLDXWPNDMQTC 515
+GS++ RL I+ M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.5 bits (63), Expect = 0.040
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Frame = +3
Query: 105 ENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE----SESTVRILAD--LQ 266
E++ SL ++ YD+ P K + T+ H + +E ++ +AD L
Sbjct: 1 ESSLSLKDILPLNPKLYDKHRAP--KFLGQPTIVYFHVTVLSIDSINEESMTYVADIFLA 58
Query: 267 MNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALRAR---VSNNG 431
+W D RL N E + +WRPD NA T + ++ + ++
Sbjct: 59 QSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDK 118
Query: 432 SVSWIKRLDISTPISMQLDXWPNDMQTC 515
++ ++ +L + +M+ + +P+D Q C
Sbjct: 119 TLLYMSKLTLVLSCAMKFESYPHDTQIC 146
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.7 bits (61), Expect = 0.070
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Frame = +3
Query: 183 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 344
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 345 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPNDMQ 509
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 510 TC 515
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.65
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 339 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMQ 509
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 510 TC 515
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.0
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -1
Query: 326 PSAAAPFPCVPTQS 285
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,360
Number of Sequences: 438
Number of extensions: 4608
Number of successful extensions: 77
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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