Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_C13
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein. 69 3e-11
BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal recog... 69 3e-11
BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein. 69 3e-11
BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein. 69 3e-11
BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein. 69 3e-11
AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition part... 69 3e-11
AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition part... 69 3e-11
AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal recogni... 68 5e-11
BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein pr... 45 3e-04
>BC105583-1|AAI05584.1| 560|Homo sapiens SRP72 protein protein.
Length = 560
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>BC046143-1|AAH46143.1| 559|Homo sapiens Similar to signal
recognition particle 72kDa protein.
Length = 559
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>BC040134-1|AAH40134.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>BC032609-1|AAH32609.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEENPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>BC017057-1|AAH17057.1| 559|Homo sapiens SRP72 protein protein.
Length = 559
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>AF077019-1|AAC27324.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>AF069765-1|AAC97490.1| 671|Homo sapiens signal recognition
particle 72 protein.
Length = 671
Score = 68.5 bits (160), Expect = 3e-11
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L++AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQKAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>AF038851-1|AAQ13423.1| 671|Homo sapiens putative signal
recognition particle protein.
Length = 671
Score = 67.7 bits (158), Expect = 5e-11
Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 2/124 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 136 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 195
Query: 245 LSVLKRAEQACSESVIDD-GGTXXXXXXXXXIIRVQQAYCLQQINREKEAATIYXNILKD 421
+ +L+ AE C S+ +D GT II Q AY LQ R +EA +Y I+K
Sbjct: 196 MKILQEAEDLCRRSLSEDTDGTEEDPQAELAIIHGQMAYILQLQGRTEEALQLYNQIIKL 255
Query: 422 KPXD 433
KP D
Sbjct: 256 KPTD 259
>BX537991-1|CAD97950.1| 626|Homo sapiens hypothetical protein
protein.
Length = 626
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 68 LKXTXDEYEDERXXNMXXXXXXXXXXXPT-SELPQFDENTYELAYNSGSTLAMRGKYNEA 244
++ + D+Y++ER N+ E E T+EL YN+ L +G+ N+A
Sbjct: 142 VRNSQDDYDEERKTNLSAVVAAQSNWEKVVPENLGLQEGTHELCYNTACALIGQGQLNQA 201
Query: 245 LSVLKRAEQACSESVIDD 298
+ +L++AE C S+ +D
Sbjct: 202 MKILQKAEDLCRRSLSED 219
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,934,341
Number of Sequences: 237096
Number of extensions: 1382128
Number of successful extensions: 3912
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3565
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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