Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_C08
(847 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 36 0.027
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.084
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.084
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.084
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.59
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.0
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 30 1.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 4.2
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.2
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 5.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 5.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 9.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 9.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 9.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 9.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 28 9.6
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 9.6
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 36.3 bits (80), Expect = 0.027
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -2
Query: 585 GXGGGXXXXXXPXXXXPPXXGXXXXGXXAXXGXXGXXXGGXXXXGXXXGGGXXXXXXXXX 406
G GGG P PP G G G G GG G GG
Sbjct: 43 GGGGGCGGGCAPPPP-PPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGG 101
Query: 405 XXXXGGG--PPPPP 370
GGG PPPPP
Sbjct: 102 GGGCGGGCAPPPPP 115
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P P A PP P P PPP P
Sbjct: 240 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Query: 568 XPPP 579
PPP
Sbjct: 300 PPPP 303
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +2
Query: 371 GGGGGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXPXXAXXPXXXXPXXG 535
G G PPP PPP PP P A P P G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P P A PP P P PPP P
Sbjct: 261 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Query: 568 XPPP 579
PPP
Sbjct: 321 PPPP 324
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +2
Query: 371 GGGGGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXPXXAXXPXXXXPXXG 535
G G PPP PPP PP P A P P G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.7 bits (76), Expect = 0.084
Identities = 18/64 (28%), Positives = 18/64 (28%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P P A PP P P PPP P
Sbjct: 246 PPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Query: 568 XPPP 579
PPP
Sbjct: 306 PPPP 309
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/55 (27%), Positives = 15/55 (27%)
Frame = +2
Query: 371 GGGGGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXPXXAXXPXXXXPXXG 535
G G PPP PPP PP P A P P G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.59
Identities = 19/66 (28%), Positives = 19/66 (28%)
Frame = -3
Query: 584 GXGGGXGXXXXXXXXXRXXXXXXGGGXXRGXGXXGXXXGGXXGXARGXGXGXXXXXXGXX 405
G G G G GG G G G GG G RG G G G
Sbjct: 59 GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGG 118
Query: 404 XXXXGG 387
GG
Sbjct: 119 GGRGGG 124
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +1
Query: 433 PXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXPXPPPXPXXAXXXXXA 612
P P P P PP PR PPP P PP P +
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 323
Query: 613 RXXXP 627
R P
Sbjct: 324 RFGPP 328
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +1
Query: 433 PXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXPXPPPXPXXAXXXXXA 612
P P P P PP PR PPP P PP P +
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPS 333
Query: 613 RXXXP 627
R P
Sbjct: 334 RFGPP 338
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/51 (33%), Positives = 17/51 (33%)
Frame = -3
Query: 584 GXGGGXGXXXXXXXXXRXXXXXXGGGXXRGXGXXGXXXGGXXGXARGXGXG 432
G GGG R GGG G G G GG G G G G
Sbjct: 130 GGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAG 180
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 380 GGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXP 493
GGPPP PPP P PP P P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +2
Query: 380 GGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXPXXAXXPXXXXPXXGGXXWXGXX 559
GGPPP PPP P P P P P P G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP--PPPPPPPGGCPPPPPPPPPGGFK 781
Query: 560 XXXXPPPXPXXXA 598
PPP P A
Sbjct: 782 GGPPPPPPPGMFA 794
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P P P P P P PPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP----PPPGGFKGGP 784
Query: 568 XPPPXP 585
PPP P
Sbjct: 785 PPPPPP 790
Score = 24.6 bits (51), Expect(2) = 5.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 391 GGPPPPPXXEXXKXXXXXXXXGAPPP 314
GGPPPPP PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 394 GGGPPPPP 371
GG PPPPP
Sbjct: 724 GGPPPPPP 731
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 380 GGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXP 493
GGPPP PPP P PP P P
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +2
Query: 380 GGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXPXXAXXPXXXXPXXGGXXWXGXX 559
GGPPP PPP P P P P P P G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP--PPPPPPPGGCPPPPPPPPPGGFK 781
Query: 560 XXXXPPPXPXXXA 598
PPP P A
Sbjct: 782 GGPPPPPPPGMFA 794
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P P P P P P PPP P
Sbjct: 729 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP----PPPGGFKGGP 784
Query: 568 XPPPXP 585
PPP P
Sbjct: 785 PPPPPP 790
Score = 24.6 bits (51), Expect(2) = 5.7
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 391 GGPPPPPXXEXXKXXXXXXXXGAPPP 314
GGPPPPP PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 394 GGGPPPPP 371
GG PPPPP
Sbjct: 724 GGPPPPPP 731
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +2
Query: 380 GGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXP 493
GGPPP PPP P PP P P
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +2
Query: 380 GGPPPXXXXXXXXXXXXXPPPXXXPXXXXPPXXXPXXPXXAXXPXXXXPXXGGXXWXGXX 559
GGPPP PPP P P P P P P G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGP--PPPPPPPGGCPPPPPPPPPGGFK 364
Query: 560 XXXXPPPXPXXXA 598
PPP P A
Sbjct: 365 GGPPPPPPPGMFA 377
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P P P P P P PPP P
Sbjct: 312 PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP----PPPGGFKGGP 367
Query: 568 XPPPXP 585
PPP P
Sbjct: 368 PPPPPP 373
Score = 24.6 bits (51), Expect(2) = 5.9
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1
Query: 391 GGPPPPPXXEXXKXXXXXXXXGAPPP 314
GGPPPPP PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 22.2 bits (45), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 394 GGGPPPPP 371
GG PPPPP
Sbjct: 307 GGPPPPPP 314
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/122 (21%), Positives = 26/122 (21%)
Frame = -2
Query: 750 GXXXXXGXXXGXGXXXXXXAXPXXXXXGXXXXXGGXXXXXXXXXXPXXXXXAXXXGXGGG 571
G G G G P G GG P G GGG
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Query: 570 XXXXXXPXXXXPPXXGXXXXGXXAXXGXXGXXXGGXXXXGXXXGGGXXXXXXXXXXXXXG 391
G G G G GG G GGG G
Sbjct: 89 GCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Query: 390 GG 385
GG
Sbjct: 149 GG 150
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/122 (21%), Positives = 26/122 (21%)
Frame = -2
Query: 750 GXXXXXGXXXGXGXXXXXXAXPXXXXXGXXXXXGGXXXXXXXXXXPXXXXXAXXXGXGGG 571
G G G G P G GG P G GGG
Sbjct: 29 GGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGG 88
Query: 570 XXXXXXPXXXXPPXXGXXXXGXXAXXGXXGXXXGGXXXXGXXXGGGXXXXXXXXXXXXXG 391
G G G G GG G GGG G
Sbjct: 89 GCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCG 148
Query: 390 GG 385
GG
Sbjct: 149 GG 150
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/66 (27%), Positives = 18/66 (27%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P P PP P P R PPP P
Sbjct: 24 PPPPDWFFPGPLRPWGPPPPWHRNRGPPPFGPPPPWDR-PPPPWRRPPWHRRPPWGLPPP 82
Query: 568 XPPPXP 585
PPP P
Sbjct: 83 PPPPEP 88
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 433 PXPXPRAXPXXPPXXXPXXPXPRXXPPP 516
P P P + P P P P P PPP
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKPTIRPPP 104
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +1
Query: 433 PXPXPRAXPXXPPXXXPXXPXPRXXPPP 516
P P P + P P P P P PPP
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKPTIRPPP 326
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +1
Query: 433 PXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXPXPPPXP 585
P P P PP P PPP P PPP P
Sbjct: 605 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +1
Query: 433 PXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXPXPPPXP 585
P P P PP P PPP P PPP P
Sbjct: 431 PHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/66 (24%), Positives = 16/66 (24%)
Frame = +1
Query: 388 PPXXXXXXPXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXP 567
PP P P PR PP P P P P P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPP 184
Query: 568 XPPPXP 585
PP P
Sbjct: 185 RTPPSP 190
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 439 PXPRAXPXXPPXXXPXXPXPRXXPPPXXXXXXRXXXXXXXXXPXPPPXP 585
P PR+ P P P P P+ PP P PPP P
Sbjct: 150 PPPRSPPPRRPPMTP--PSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 412 PXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPP 516
P P P P PP P P P PPP
Sbjct: 50 PMPVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPP 84
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +1
Query: 412 PXXXXXXPXPXPRAXPXXPPXXXPXXPXPRXXPPP 516
P P P P P P P P P PPP
Sbjct: 489 PAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3
Query: 578 GGGXGXXXXXXXXXRXXXXXXGGGXXRGXGXXGXXXGGXXGXARGXG 438
GGG G + GGG G G G GG G G G
Sbjct: 67 GGGYGGAGGFGGAYQAAPAIGGGGSYAGAGPIGGGFGGAQGGYAGAG 113
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,928,590
Number of Sequences: 27780
Number of extensions: 181416
Number of successful extensions: 1003
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 354
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -