Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_C07
         (807 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0507 + 25017031-25017333,25017397-25017855                       32   0.47 
12_01_0018 + 132654-133304,133726-134265,134357-134436,134673-13...    30   1.9  
11_01_0019 + 135610-136296,136736-137275,137367-137518,137683-13...    29   3.3  
04_04_1335 - 32730516-32730570,32730655-32731154,32731235-327314...    29   3.3  
07_03_1736 + 29130118-29130294,29130649-29130703,29130837-291310...    24   6.4  
01_01_1108 + 8758486-8758815,8758913-8758960,8761512-8761664,876...    28   7.6  

>03_05_0507 + 25017031-25017333,25017397-25017855
          Length = 253

 Score = 32.3 bits (70), Expect = 0.47
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = -2

Query: 332 NAHV*FGYNARAAVSL--AATSFLIVDQTSALPYDRYVHGGNSF 207
           NA     Y+ARAA S+  A    L V   +A+P DR+ H G+ F
Sbjct: 117 NAQAYHAYHARAAASVRVAVHDALFVRDLAAIPEDRWAHDGDYF 160


>12_01_0018 +
           132654-133304,133726-134265,134357-134436,134673-134949
          Length = 515

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = -2

Query: 311 YNARAAVSL--AATSFLIVDQTSALPYDRYVHGGNSF 207
           Y+ARAA S+  AA   L     +A+P DR+ H G+ F
Sbjct: 81  YHARAAASVRVAAHDALFARDLAAIPEDRWAHDGDYF 117


>11_01_0019 +
           135610-136296,136736-137275,137367-137518,137683-137959
          Length = 551

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
 Frame = -2

Query: 311 YNARAAVSL--AATSFLIVDQTSALPYDRYVHGGNSF 207
           Y+ARAA S+  AA + L     +A+P D++ H G+ F
Sbjct: 93  YHARAAASVRVAAHNALFARDLAAIPEDKWAHDGDYF 129


>04_04_1335 -
           32730516-32730570,32730655-32731154,32731235-32731416,
           32732673-32732779,32733364-32733395,32733499-32733542,
           32733816-32733977,32734356-32734755
          Length = 493

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +3

Query: 99  IASEREHRAMLCGNVLSVLLFVIGERSLSCDAIKDGK 209
           +A +  HR  L  +VLSV +F     + + DAIK GK
Sbjct: 421 VADQVGHRVRLSPSVLSVFVFSSAAIAFTYDAIKSGK 457


>07_03_1736 +
           29130118-29130294,29130649-29130703,29130837-29131048,
           29131201-29131322,29131406-29131559,29131849-29131918,
           29132007-29132152,29132238-29132310,29132366-29132418,
           29132514-29132658,29132945-29133063,29133171-29133242,
           29133336-29133439,29133695-29133751,29133861-29134059,
           29134169-29134312,29134418-29134537
          Length = 673

 Score = 23.8 bits (49), Expect(2) = 6.4
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 308 NARAAVSLAATSFLIVDQTSALPYDRYV-HG 219
           N+R  ++ + +  + +DQ S +P D Y+ HG
Sbjct: 213 NSRLQLTTSKSGVIWLDQVSVMPSDTYMGHG 243



 Score = 23.0 bits (47), Expect(2) = 6.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 110 FRRDRLQSLSQLKPQF 63
           FR+D    L+ LKPQF
Sbjct: 244 FRKDLASMLANLKPQF 259


>01_01_1108 +
           8758486-8758815,8758913-8758960,8761512-8761664,
           8761749-8761847,8761884-8761991,8762078-8762200,
           8763030-8763287
          Length = 372

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +2

Query: 344 IMQDWL-GIRGEDRQLCTEMHXRVRERNLRGARXVHLSXASGP 469
           IM+D L G+ G +  +  E   R  ER LRGA   H   A+GP
Sbjct: 275 IMKDRLEGMTGANYLVIHEKLTRASERWLRGASLEHREAAAGP 317


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,993,220
Number of Sequences: 37544
Number of extensions: 300628
Number of successful extensions: 740
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2197677108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)