Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_C06
(811 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75953-4|CAJ85747.1| 294|Caenorhabditis elegans Hypothetical pr... 73 3e-13
Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical pr... 73 3e-13
AF166171-1|AAD49860.1| 611|Caenorhabditis elegans adducin-head-... 73 3e-13
AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-relat... 60 2e-09
AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-relat... 60 2e-09
AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin prote... 60 2e-09
AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin prote... 60 2e-09
AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin prote... 60 2e-09
AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin prote... 60 2e-09
AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin prote... 60 2e-09
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 35 0.060
Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical pr... 34 0.14
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 31 0.74
AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical ... 31 0.98
Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical p... 29 3.9
Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical pr... 29 3.9
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 5.2
AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical ... 29 5.2
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 28 6.9
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 28 6.9
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 28 6.9
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 28 6.9
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 28 6.9
AL132949-13|CAB70106.2| 425|Caenorhabditis elegans Hypothetical... 28 6.9
AF197575-1|AAF18441.1| 425|Caenorhabditis elegans ASC-1 protein. 28 6.9
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical pr... 28 9.1
Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical pr... 28 9.1
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 9.1
>Z75953-4|CAJ85747.1| 294|Caenorhabditis elegans Hypothetical
protein F57F5.4b protein.
Length = 294
Score = 72.5 bits (170), Expect = 3e-13
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA++YRLVDLF W+ G+ IT R++T +++L + G L EV+ASSL+KVD+ G
Sbjct: 41 RNKLASLYRLVDLFRWSQ-GIYNHITVRVSTDPDEILINAFGQLYSEVSASSLIKVDLDG 99
Query: 651 VVQXQGTTNFPVTSK--VLGARVRARGPSDLXXVGARXPALRFAXSAXRGGVLXL 809
V G+TNF V VL + + P V P++ A SA + G+L +
Sbjct: 100 TVIDGGSTNFGVNQAGYVLHSAIHNGRPEVKCVVHLHHPSV-VAVSAQKCGLLPI 153
>Z75953-3|CAB00100.1| 611|Caenorhabditis elegans Hypothetical
protein F57F5.4a protein.
Length = 611
Score = 72.5 bits (170), Expect = 3e-13
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA++YRLVDLF W+ G+ IT R++T +++L + G L EV+ASSL+KVD+ G
Sbjct: 358 RNKLASLYRLVDLFRWSQ-GIYNHITVRVSTDPDEILINAFGQLYSEVSASSLIKVDLDG 416
Query: 651 VVQXQGTTNFPVTSK--VLGARVRARGPSDLXXVGARXPALRFAXSAXRGGVLXL 809
V G+TNF V VL + + P V P++ A SA + G+L +
Sbjct: 417 TVIDGGSTNFGVNQAGYVLHSAIHNGRPEVKCVVHLHHPSV-VAVSAQKCGLLPI 470
>AF166171-1|AAD49860.1| 611|Caenorhabditis elegans
adducin-head-domain-related protein protein.
Length = 611
Score = 72.5 bits (170), Expect = 3e-13
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA++YRLVDLF W+ G+ IT R++T +++L + G L EV+ASSL+KVD+ G
Sbjct: 358 RNKLASLYRLVDLFRWSQ-GIYNHITVRVSTDPDEILINAFGQLYSEVSASSLIKVDLDG 416
Query: 651 VVQXQGTTNFPVTSK--VLGARVRARGPSDLXXVGARXPALRFAXSAXRGGVLXL 809
V G+TNF V VL + + P V P++ A SA + G+L +
Sbjct: 417 TVIDGGSTNFGVNQAGYVLHSAIHNGRPEVKCVVHLHHPSV-VAVSAQKCGLLPI 470
>AF166168-1|AAD49857.1| 679|Caenorhabditis elegans adducin-related
protein protein.
Length = 679
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>AF166167-1|AAD49856.1| 732|Caenorhabditis elegans adducin-related
protein protein.
Length = 732
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>AF039043-6|AAP82653.1| 718|Caenorhabditis elegans Adducin protein
1, isoform e protein.
Length = 718
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>AF039043-5|AAK70639.1| 732|Caenorhabditis elegans Adducin protein
1, isoform b protein.
Length = 732
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>AF039043-4|AAL32219.1| 702|Caenorhabditis elegans Adducin protein
1, isoform c protein.
Length = 702
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>AF039043-3|AAM54181.1| 682|Caenorhabditis elegans Adducin protein
1, isoform d protein.
Length = 682
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>AF039043-2|AAK70638.1| 679|Caenorhabditis elegans Adducin protein
1, isoform a protein.
Length = 679
Score = 59.7 bits (138), Expect = 2e-09
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 471 RCKLAAVYRLVDLFGWTTTGVTGQITARLNTAEEQVLTSPRGLLPHEVTASSLVKVDMQG 650
R KLA ++RL DLF W+ G+ +I+ R N + L +P GLL HE+TA+++VK+D G
Sbjct: 124 RNKLACLFRLADLFQWSQ-GIHNEISYRTNDEDNTFLMNPFGLLYHEITAATIVKIDENG 182
Query: 651 VVQXQGT 671
+ GT
Sbjct: 183 KILDCGT 189
Score = 47.6 bits (108), Expect = 1e-05
Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Frame = +2
Query: 134 RRSRTAPGPXSTEEED-ERLK--QRPADIDADVREMERRKRVEALMSSKLFREELERVLD 304
R+ + P + +D E +K QRPA I D+ EMERRKRV+ ++ SK F ELE V+
Sbjct: 4 RKEKERERPYYRDPDDPEYIKDLQRPAVIKEDLSEMERRKRVQQILESKSFCHELEEVIR 63
Query: 305 QQMHEGGDAP----LLQRIKEMV--GGRLHTGSL 388
Q+ P +LQ++ ++ G + G+L
Sbjct: 64 QECDTARTDPDHLQVLQKLSDLTVPQGNMSFGNL 97
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 35.1 bits (77), Expect = 0.060
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 98 RLELSEWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRV-EALMSSKL 274
R+E E L RR + EE+++R K ++ ++E E+RKRV E M K
Sbjct: 426 RIEEEERLEEI-RRKKEEERKKKEEEDEKRRKAEESERVRKLKEEEKRKRVLEEEMEMKR 484
Query: 275 FREELERVLDQQMHEGGDAPLLQRIKE 355
EE + L+ +M E + ++R +E
Sbjct: 485 KNEEAKIKLEAEMREKAEQAEIKRREE 511
>Z81078-3|CAB03077.3| 1388|Caenorhabditis elegans Hypothetical protein
F36H2.3 protein.
Length = 1388
Score = 33.9 bits (74), Expect = 0.14
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 225 AKWNAGSASKLSCPRSCSAKNWNGSSTSRCTRAA---TLRSCRGSRRWSAGDCTPEAS 389
A W AGS + +SCP + + G+S S CT +A L SC GS A T S
Sbjct: 1275 APWTAGSTATMSCP---AGQTVIGTSISYCTNSAWSPALGSCSGSSVGQASTTTTTCS 1329
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
F47A4.2 protein.
Length = 3498
Score = 31.5 bits (68), Expect = 0.74
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Frame = +2
Query: 47 KDSCYRITNPGLA*QINRLELSEWLRRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVR 226
K++ R A + RLEL + R E +ER++Q ++A+ R
Sbjct: 2608 KEAARRAAEEAYAAEQQRLELLRRQEEERLRKEAEERMRIQRENEERVRQEQMRLEAEER 2667
Query: 227 EMERR---KRVEALMSSKLFREELERVLDQQMHEGGDA 331
E RR +R++ + K+ RE+ E ++ + +A
Sbjct: 2668 ERIRRAEEERIQKELEDKVRREKEEAARQEKERQEQEA 2705
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 0.74
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 122 RRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKR-VEALMSSKLFREELERV 298
RR R+ EEE RL + +A VR+ ERR++ E + +L + + +
Sbjct: 174 RRQHEAERSQIEERRREEESRRLAAQRETDEARVRDEERRRQETEKEVEKELNDKRTQSM 233
Query: 299 LDQQMHEGGD 328
+Q +EGGD
Sbjct: 234 NEQFEYEGGD 243
>AF016424-7|AAB65329.3| 520|Caenorhabditis elegans Hypothetical
protein F39G3.3 protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.98
Identities = 21/66 (31%), Positives = 34/66 (51%)
Frame = +2
Query: 122 RRTQRRSRTAPGPXSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVL 301
R QR++R G + D+ ++++ + D REMER+KR AL K E +R
Sbjct: 335 RENQRKARHEIGKIRVQVLDD-MRKKEKEKDIKKREMERKKR-HALQEKKEEAEAAKRRE 392
Query: 302 DQQMHE 319
++ HE
Sbjct: 393 ARKKHE 398
>Z80224-1|CAB02323.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 173 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 292
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67755-10|CAA91761.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 173 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 292
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>Z67754-4|CAA91753.1| 1577|Caenorhabditis elegans Hypothetical
protein C34E11.3 protein.
Length = 1577
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +2
Query: 173 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELE 292
EE+E+LK D+ ++ EM+ + R E + + + ELE
Sbjct: 126 EENEQLKAEVKDLQQEIEEMQDQYREEEIEEFRELQRELE 165
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 28.7 bits (61), Expect = 5.2
Identities = 14/63 (22%), Positives = 36/63 (57%)
Frame = +2
Query: 170 EEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPLLQRI 349
E ED R+ + +++++ E E +++ K ++L+ +++++++ GD L Q+
Sbjct: 52 EPEDRRVPEVAEEVESEDEE-EEDVQIKYPYERKDAYQDLQERIERRLNDSGDEKLEQKA 110
Query: 350 KEM 358
KE+
Sbjct: 111 KEL 113
>AC025716-3|AAK39618.1| 690|Caenorhabditis elegans Hypothetical
protein Y39G10AR.10 protein.
Length = 690
Score = 28.7 bits (61), Expect = 5.2
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = +2
Query: 149 APGPXSTEEEDERLKQRPADIDAD---VREMERRKRVEALMSSKLFREELERVLDQQMHE 319
A T E+ LK D+ A+ ++EM+ R L SK F+E L R+ D+
Sbjct: 76 ASSAQETTSEENNLKILNRDLVAENLELKEMKEELRKIWLSDSKKFQEALTRISDENTKL 135
Query: 320 GGDAPLLQRIKE 355
D L+ I++
Sbjct: 136 QKDCHELESIRQ 147
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +2
Query: 149 APGPXSTEEEDERLKQRPADIDADVREMERRKR 247
+P P S +EE E+ +++ I+ + RE ++R+R
Sbjct: 502 SPSPPSDDEEKEKEREKERLIEKERRERDQRRR 534
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 ELSEWLRRTQRRSRTAPGPXSTEE-EDERLKQRPADIDADVREMERRKRVEALMSSKLFR 280
E +E R+T R E E+ER ++ A+ + RE +R+E ++ R
Sbjct: 376 EKAEEERKTMERLERERARLERERLEEERRQKEKAETERIERERREHERIEIERIERIKR 435
Query: 281 EELER 295
E +ER
Sbjct: 436 ERIER 440
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 ELSEWLRRTQRRSRTAPGPXSTEE-EDERLKQRPADIDADVREMERRKRVEALMSSKLFR 280
E +E R+T R E E+ER ++ A+ + RE +R+E ++ R
Sbjct: 376 EKAEEERKTMERLERERARLERERLEEERRQKEKAETERIERERREHERIEIERIERIKR 435
Query: 281 EELER 295
E +ER
Sbjct: 436 ERIER 440
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 ELSEWLRRTQRRSRTAPGPXSTEE-EDERLKQRPADIDADVREMERRKRVEALMSSKLFR 280
E +E R+T R E E+ER ++ A+ + RE +R+E ++ R
Sbjct: 376 EKAEEERKTMERLERERARLERERLEEERRQKEKAETERIERERREHERIEIERIERIKR 435
Query: 281 EELER 295
E +ER
Sbjct: 436 ERIER 440
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 104 ELSEWLRRTQRRSRTAPGPXSTEE-EDERLKQRPADIDADVREMERRKRVEALMSSKLFR 280
E +E R+T R E E+ER ++ A+ + RE +R+E ++ R
Sbjct: 376 EKAEEERKTMERLERERARLERERLEEERRQKEKAETERIERERREHERIEIERIERIKR 435
Query: 281 EELER 295
E +ER
Sbjct: 436 ERIER 440
>AL132949-13|CAB70106.2| 425|Caenorhabditis elegans Hypothetical
protein Y53F4B.15 protein.
Length = 425
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 158 PXSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPL 337
P + + E LK R ++ A +RE ER+K V +L E+ R + + + P+
Sbjct: 151 PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRSGTEALQDKNDPV 209
Query: 338 LQRIKEMV 361
+QRI E V
Sbjct: 210 IQRIMERV 217
>AF197575-1|AAF18441.1| 425|Caenorhabditis elegans ASC-1 protein.
Length = 425
Score = 28.3 bits (60), Expect = 6.9
Identities = 21/68 (30%), Positives = 34/68 (50%)
Frame = +2
Query: 158 PXSTEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAPL 337
P + + E LK R ++ A +RE ER+K V +L E+ R + + + P+
Sbjct: 151 PFLSASDREALKLRREELKA-LREKERKKFVVSLDFDGGVVHEMTRRSGTEALQDKNDPV 209
Query: 338 LQRIKEMV 361
+QRI E V
Sbjct: 210 IQRIMERV 217
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 27.9 bits (59), Expect = 9.1
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 7/100 (7%)
Frame = +2
Query: 119 LRRTQRRSRTAPGPXSTEEEDERLKQ--RPADIDADVREMERRKRVEALMSSKLFR---- 280
L TQ+ PGP +E+E E K R + DA+V ++ + K
Sbjct: 51 LGETQKYKMAVPGPGHSEQEQELHKSLIRDEEEDAEVEQVFAASAEPVVTPPKSLNFAET 110
Query: 281 -EELERVLDQQMHEGGDAPLLQRIKEMVGGRLHTGSLRGS 397
EEL DQ++ + P + + G GS+ GS
Sbjct: 111 AEELRHAYDQKIRKRPTTPTSACVLD--GIAFFAGSVDGS 148
>Z81041-9|CAJ55253.1| 824|Caenorhabditis elegans Hypothetical
protein C27A7.1b protein.
Length = 824
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 254 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 364
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 82 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 116
>Z81041-8|CAB02784.1| 829|Caenorhabditis elegans Hypothetical
protein C27A7.1a protein.
Length = 829
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +2
Query: 254 ALMSSKLFREELERVLDQQMHEGGDAPLLQRIKEMVG 364
A+ SSK+ EEL R L Q + + G P L+R+ M G
Sbjct: 87 AMSSSKVQLEELTRKLSQPLEQLG--PTLERLSNMPG 121
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 173 EEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLD-QQMHEGGDAPLLQRI 349
+ +E +KQ+ + + + + ++++E L KLF + + L ++ H+ + L+++
Sbjct: 249 KREEEIKQQNQEREKQINDDFEKRKLEKLQREKLFEKNKQAKLQREKAHQESERRKLEKL 308
Query: 350 K 352
K
Sbjct: 309 K 309
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,234,461
Number of Sequences: 27780
Number of extensions: 323624
Number of successful extensions: 1566
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1548
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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