Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_C05
         (794 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   2.5  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.7  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    22   7.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    21   10.0 
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   10.0 

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +2

Query: 530 YPHHPHNP*STLTVLSWSTMKPSMTSAAVISTLSAQ 637
           +PH P  P +T+T ++ +T   + T+    +  + Q
Sbjct: 647 HPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQ 682



 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +2

Query: 539 HPHNP*STLTVLSWSTMKPSMTSAAVISTLSAQPT 643
           HPH P +  T ++  T   + T+    +T +   T
Sbjct: 647 HPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTT 681


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = -1

Query: 32  PSRHYRSGLQ 3
           P RHYRSGL+
Sbjct: 139 PLRHYRSGLK 148


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 67  MARCPQTRPSGVETILSTLSSARPE 141
           +A+ P      + T+ ST+SSA+PE
Sbjct: 7   VAQLPHHLSPNMPTMDSTVSSAKPE 31


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 331 ESASSLTSVPVCKDS*SSTPSVEVPALGSLPY*WS 435
           +S SS   V   ++S SS+PS+++   G L   WS
Sbjct: 357 QSQSSPKFVARREESNSSSPSLDLGKEGGLEAQWS 391


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 10.0
 Identities = 11/32 (34%), Positives = 14/32 (43%)
 Frame = +3

Query: 132 ETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQL 227
           E  A  H+    + D+EPTV         RQL
Sbjct: 236 ERRAQSHLEAHCYFDIEPTVQQHQPVTVNRQL 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,504
Number of Sequences: 438
Number of extensions: 5049
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)