Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP10_FL5_C04
         (814 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF284337-1|AAG14458.1|  221|Homo sapiens SEBOX protein.                33   1.2  
AK125081-1|BAC86046.1|  144|Homo sapiens protein ( Homo sapiens ...    31   3.7  

>AF284337-1|AAG14458.1|  221|Homo sapiens SEBOX protein.
          Length = 221

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
 Frame = +3

Query: 633 PQEDHPARHRSYP--GLSPRQPWLLQSGAPPWTVSGPRWVTP 752
           PQ     RH S P  GLSPRQ W       PW  +G   V P
Sbjct: 150 PQRTSVCRHSSCPAPGLSPRQGWEGAKAVAPWGSAGASEVHP 191


>AK125081-1|BAC86046.1|  144|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43091 fis, clone COLON2002443. ).
          Length = 144

 Score = 31.5 bits (68), Expect = 3.7
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +3

Query: 621 PQAVPQEDHPARHRSYPGLS-PRQPWLLQSGAPPWTVSGPRW 743
           P+  PQ  HPA H + P    PR  WL  +  PP    G RW
Sbjct: 51  PEGGPQTQHPAGHPALPCTPVPRGSWLRVTSHPPALGEG-RW 91


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,819,971
Number of Sequences: 237096
Number of extensions: 2783898
Number of successful extensions: 12834
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12834
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10092110758
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)