Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP10_FL5_C01
(817 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 39 6e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 38 8e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 37 3e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 3e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 35 0.001
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 34 0.001
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 33 0.003
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 33 0.003
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 30 0.022
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.16
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.9
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 7.8
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 44.0 bits (99), Expect = 2e-06
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 6/95 (6%)
Frame = +2
Query: 110 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 274
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 275 MNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVL 376
+ W L W + E+ ++ V S +W D+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 44.0 bits (99), Expect = 2e-06
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 9/129 (6%)
Frame = +2
Query: 92 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 250
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 251 VRIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRXDVVLLXAAAXTXXDXALRPVX 427
+ L+ W D + W+ E+G T L V SE +W D+VL A +
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 428 LN-XGSVXW 451
L+ G V W
Sbjct: 127 LHYTGKVLW 135
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.5 bits (88), Expect = 4e-05
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 9/132 (6%)
Frame = +2
Query: 83 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 241
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 242 ESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAAAXTXXDXALR 418
T + ++ W D +L WN ++ G T V SE +W D+VL A +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMT 123
Query: 419 PVXL-NXGSVXW 451
L + G V W
Sbjct: 124 KAILHHTGKVVW 135
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 38.7 bits (86), Expect = 6e-05
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +2
Query: 116 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 283
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 284 IDKRLXWNAGEWGCSTWLVSSERLWRXD 367
+D+RL + G+ + + R+W+ D
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPD 89
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 38.3 bits (85), Expect = 8e-05
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 9/123 (7%)
Frame = +2
Query: 110 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 268
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 269 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRXDVVLLXAAAXTXXDXALRPVXLN-XGS 442
++ +W D +L W+ E+G L V S+ +WR D+VL A LN G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 443 VXW 451
V W
Sbjct: 137 VEW 139
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 79
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 36.7 bits (81), Expect = 3e-04
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +2
Query: 227 NIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXDVVLLXAA 388
++ E + A L++ W+D L WN E+ G ++ +LW+ D+++ +A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSA 147
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 36.3 bits (80), Expect = 3e-04
Identities = 31/114 (27%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Frame = +2
Query: 137 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 295
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 296 LXWNAGEWGCSTWL-VSSERLWRXDVVLLXAAAXTXXDXALRPVXLN-XGSVXW 451
L WN E+G L V SE +W D+VL A + L G V W
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYNNADGNYEVTLMTKATLKYTGDVSW 148
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 35.5 bits (78), Expect = 6e-04
Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLX 301
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 302 WNAGEWGCSTWL-VSSERLWRXDVVLL-XAAAXTXXDXALRPVXLNXGSVXW 451
W E+G L V S+ +WR D+VL A A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 34.7 bits (76), Expect = 0.001
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLX 301
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 302 WNAGEWGCSTWL-VSSERLWRXDVVL 376
W E+G L V S+ +WR D+VL
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVL 117
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 34.3 bits (75), Expect = 0.001
Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 3/90 (3%)
Frame = +2
Query: 191 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRXD 367
+V L+LH ++ E + + W D L WNA E+ G V R+WR D
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 368 VVLLXAAAXTXXDXALRP--VXLNXGSVXW 451
+L A + + + G V W
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVW 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 33.1 bits (72), Expect = 0.003
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2
Query: 188 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWR 361
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 362 XDVVLLXAA 388
D+VL A
Sbjct: 111 PDIVLFNNA 119
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 33.1 bits (72), Expect = 0.003
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +2
Query: 89 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 253
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 254 RIQADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRXDVVLLXAA 388
L++ W D + WN ++G L + RLW+ DV++ +A
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSA 116
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.3 bits (65), Expect = 0.022
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Frame = +2
Query: 137 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 295
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 296 LXWN--AGEWGCSTWLVSSERLWRXDV 370
L +N G T L + R+W D+
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDL 120
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 27.5 bits (58), Expect = 0.16
Identities = 18/86 (20%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Frame = +2
Query: 125 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 289
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 290 KRLXWNAGEWGCSTWLVSSERLWRXD 367
RL + S + ER+WR D
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPD 121
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 5.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 334 PSAAAPLPCVPXQS 293
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 21.8 bits (44), Expect = 7.8
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = -3
Query: 371 PRXXSTSVPRT-PAKCCSPTPLRSXSVVCRSNSFED 267
P + ++P T P + + PL + V CR+N E+
Sbjct: 15 PDLDNVTMPETTPRRKKNKKPLPTECVFCRNNGEEE 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,405
Number of Sequences: 438
Number of extensions: 2634
Number of successful extensions: 35
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25974678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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